RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 IRGMA1A4Y4 181 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 TVP23AA6NH52 213 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 C12orf71A8MTZ7 269 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 ZNF99A8MXY4 864 aaPredicted RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 CENPBD1B2RD01 187 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 XKRYO14609 159 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 ABHD16AO95870 558 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 TGM6O95932 706 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 RENP00797 406 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 ZNF43P17038 809 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 LIPAP38571 399 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 SELENOPP49908 381 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 HCCSP53701 268 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SRYQ05066 204 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 CAMK2DQ13557 499 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 PON3Q15166 354 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SSX1Q16384 188 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 PCK2Q16822 640 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 C10orf128Q5T292 105 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 OR2G6Q5TZ20 316 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 LCN1P1Q5VSP4 162 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 TMEM225Q6GV28 225 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 C19orf48Q6RUI8 117 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 PCSK4Q6UW60 755 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 ZNF367Q7RTV3 350 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 CDC20BQ86Y33 519 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 MEIOBQ8N635 442 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 POMGNT2Q8NAT1 580 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SYT14Q8NB59 555 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 PROKR2Q8NFJ6 384 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SLC26A10Q8NG04 563 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 OR2T4Q8NH00 348 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 PNPLA2Q96AD5 504 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 ZHX1-C8orf76Q96EF9 292 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SLC25A44Q96H78 314 aaPredicted RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 FOXN4Q96NZ1 517 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 AMELYQ99218 206 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 WDR76Q9H967 626 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 RNF122Q9H9V4 155 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 BCO1Q9HAY6 547 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 SRA1Q9HD15 236 aaKnown RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 TUBD1Q9UJT1 453 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 RCE1Q9Y256 329 aa9.21□□□□□ -0.94
TPM3-217ENST00000504663 EXOSC1Q9Y3B2 195 aaKnown RBP9.21□□□□□ -0.94
TPM3-217ENST00000504663 DOCK7Q96N67 2140 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 PIEZO2Q9H5I5 2752 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 A0A1W2PQL4 384 aaPredicted RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 TRIM64BA6NI03 449 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 SNTNA6NMZ2 147 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 H3BSA7 217 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 SLC16A7O60669 478 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 MPZL1O95297 269 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 IGHG1P01857 330 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 RPS7P62081 194 aaKnown RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 RASGEF1BQ0VAM2 473 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 POU4F2Q12837 409 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 LHFPL3Q86UP9 236 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 ATCAYQ86WG3 371 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 SLC35F2Q8IXU6 374 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 C20orf196Q8IYI0 205 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 ACBD7Q8N6N7 88 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 OR52N1Q8NH53 320 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 FCGR1BQ92637 280 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 MCHR2Q969V1 340 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 NABP1Q96AH0 204 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 COG8Q96MW5 612 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 GPR137Q96N19 417 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 DOK1Q99704 481 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 ISG20L2Q9H9L3 353 aaKnown RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 ZNF71Q9NQZ8 489 aaPredicted RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 H2AFY2Q9P0M6 372 aaPredicted RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 COA3Q9Y2R0 106 aaPredicted RBP9.2□□□□□ -0.94
TPM3-217ENST00000504663 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 FREM1Q5H8C1 2179 aa9.2□□□□□ -0.94
TPM3-217ENST00000504663 NCOA6Q14686 2063 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 A0A1B0GTH9 108 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 SMIM31A0A1B0GVY4 71 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 TMEM8BA6NDV4 472 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 ZNF724A8MTY0 619 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 NPIPA2E9PIF3 369 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 NPIPA3F8WFD2 350 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 M0R3G1 203 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 LRRTM2O43300 516 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 UPK3AO75631 287 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 CRABP1P29762 137 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 RPS27P42677 84 aaKnown RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 MMP16P51512 607 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 RPS3AP61247 264 aaKnown RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 ACSM1Q08AH1 577 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 C1DQ13901 141 aaKnown RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 GALEQ14376 348 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 MEP1BQ16820 701 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 CDONQ4KMG0 1287 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 PRR30Q53SZ7 412 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 PDSS1Q5T2R2 415 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 CARD17Q5XLA6 110 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 ZNF322Q6U7Q0 402 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms