RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	SLC35D2	Q76EJ3	337 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	NUBPL	Q8TB37	319 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	RNF128	Q8TEB7	428 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	RNF138	Q8WVD3	245 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM234	Q8WY98	164 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	HGD	Q93099	445 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	FOXN4	Q96NZ1	517 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	ULBP3	Q9BZM4	244 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	OR51J1	Q9H342	316 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	KLHL9	Q9P2J3	617 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	RCE1	Q9Y256	329 aa		11.74	□□□□□ -0.53
MATR3-233	ENST00000504203	TNRC18	O15417	2968 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM200C	A6NKL6	621 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	CENPBD1	B2RD01	187 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	GMDS	O60547	372 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	OR6A2	O95222	327 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	H2AFB2	P0C5Z0	115 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	HLA-DOB	P13765	273 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	IL11	P20809	199 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	CDK2	P24941	298 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	STOM	P27105	288 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	ART1	P52961	327 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	ACY1	Q03154	408 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM255A	Q5JRV8	349 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM69	Q5SWH9	247 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	OR5M10	Q6IEU7	315 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC18B1	Q6NT16	456 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	DNM1P46	Q6ZS02	220 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	TMPRSS12	Q86WS5	348 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	OR56B4	Q8NH76	319 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	ST8SIA1	Q92185	356 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC7A5P2	Q9GIP4	190 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	HRASLS	Q9HDD0	168 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	SUSD2	Q9UGT4	822 aa		11.73	□□□□□ -0.53
MATR3-233	ENST00000504203	LY6G6E	A0A0G2JKS1	128 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203		A0A1W2PQM1	296 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MS4A18	H0YCH9	400 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	FABP7	O15540	132 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	KRT33A	O76009	404 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	TPPP	O94811	219 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ECD	O95905	644 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	PNP	P00491	289 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MAS1	P04201	325 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	HEXB	P07686	556 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MRPS10	P82664	201 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	C17orf67	Q0P5P2	114 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ZP4	Q12836	540 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MELK	Q14680	651 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MS4A18	Q3C1V0	323 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	GUSBP11	Q6P575	273 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	HYLS1	Q96M11	299 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	WDR77	Q9BQA1	342 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ACTR6	Q9GZN1	396 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	EMC7	Q9NPA0	242 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	KLK11	Q9UBX7	282 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203		U3KQA8	63 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	FREM3	P0C091	2139 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	TRIOBP	Q9H2D6	2365 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	C2orf72	A6NCS6	295 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ANXA2P2	A6NMY6	339 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203		H0YC42	278 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF780A	O75290	641 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ALOX12B	O75342	701 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	LDOC1	O95751	146 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ANXA2	P07355	339 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	DCN	P07585	359 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	SPARC	P09486	303 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	EPHA8	P29322	1005 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	SUMO3	P55854	103 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	PLA2G7	Q13093	441 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ST3GAL2	Q16842	350 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ODF4	Q2M2E3	257 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	CDH24	Q86UP0	819 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	OR11G2	Q8NGC1	345 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	THAP3	Q8WTV1	239 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	FCAMR	Q8WWV6	532 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	THRSP	Q92748	146 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	OR6C1	Q96RD1	312 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	MRPL15	Q9P015	296 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	STEAP1	Q9UHE8	339 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC22A13	Q9Y226	551 aa		11.72	□□□□□ -0.53
MATR3-233	ENST00000504203	ANKRD20A5P	A0PJZ0	165 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	NAP1L6	A6NFF2	107 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	AKR7A2	O43488	359 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	ONECUT2	O95948	504 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	CXCL3	P19876	107 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	SDHB	P21912	280 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	CRABP1	P29762	137 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	TAS2R20	P59543	309 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	AP3S2	P59780	193 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	ADAM8	P78325	824 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	PUDP	Q08623	228 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	ELFN2	Q5R3F8	820 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF385C	Q66K41	422 aa	Predicted RBP	11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	ASPHD2	Q6ICH7	369 aa		11.71	□□□□□ -0.53
MATR3-233	ENST00000504203	GLB1L2	Q8IW92	636 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms