RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PROK1P58294 105 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 BTG1P62324 171 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 HOXC5Q00444 222 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 PUDPQ08623 228 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 FAM189A2Q15884 450 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 THEM4Q5T1C6 240 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 KPRPQ5T749 579 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 UNQ6126/PRO20091Q6UXV3 157 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 NHLRC1Q6VVB1 395 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF621Q6ZSS3 439 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC16A14Q7RTX9 510 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 C4orf33Q8N1A6 199 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 BHLHE22Q8NFJ8 381 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 LINC01006Q8NI28 216 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 IPCEF1Q8WWN9 437 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 ZIM3Q96PE6 472 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC19A3Q9BZV2 496 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 KLHL21Q9UJP4 597 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 IFT52Q9Y366 437 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 CHST2Q9Y4C5 530 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 RYR3Q15413 4870 aa13.27□□□□□ -0.28
PDLIM7-210ENST00000503827 SERPINI2O75830 405 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 KRT75O95678 551 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 BCHEP06276 602 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 CSF1P09603 554 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 CCNOP22674 350 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 AHCYP23526 432 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 MPV17P39210 176 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 BIDP55957 195 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 TNFAIP6P98066 277 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 SPRNQ5BIV9 151 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 ZMAT1Q5H9K5 638 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 SPATA46Q5T0L3 261 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 WDR88Q6ZMY6 472 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 RBM15BQ8NDT2 890 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 OR6S1Q8NH40 331 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 MRAPQ8TCY5 172 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 TMEM54Q969K7 222 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 SLC35B4Q969S0 331 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 THOC1Q96FV9 657 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 FAM71F1Q96KD3 344 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 EPYCQ99645 322 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 SSBP3Q9BWW4 388 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 EIF3KQ9UBQ5 218 aaKnown RBP13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 TRIM33Q9UPN9 1127 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 POMT1Q9Y6A1 747 aa13.27□□□□□ -0.29
PDLIM7-210ENST00000503827 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 E9PBE3 544 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 DHHO43323 396 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 CDKN2CP42773 168 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 BPIFB3P59826 476 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 PAX2Q02962 417 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 ALG10BQ5I7T1 473 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 GPR157Q5UAW9 335 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 MBNL2Q5VZF2 373 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 ZNF283Q8N7M2 679 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 DNAJA4Q8WW22 397 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 DYRK2Q92630 601 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 PPP1R36Q96LQ0 422 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 AKTIPQ9H8T0 292 aa13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 MRPL39Q9NYK5 338 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-210ENST00000503827 A0A0G2JPF8 293 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 A0A1B0GWA3 101 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HNRNPCL2B2RXH8 293 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HNRNPCL3B7ZW38 293 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HNRNPCL1O60812 293 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 BGLAPP02818 100 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 MELTFP08582 738 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 WNT2P09544 360 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HNRNPCL4P0DMR1 293 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 TNFRSF1AP19438 455 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 CPT2P23786 658 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 MDH2P40926 338 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 GNB2P62879 340 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HSF2Q03933 536 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 RPS26P11Q5JNZ5 115 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 TMEM255AQ5JRV8 349 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 VAX1Q5SQQ9 334 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 MUC20Q8N307 709 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 LSMEM1Q8N8F7 131 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 OR6X1Q8NH79 312 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 SLC25A40Q8TBP6 338 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 KLF14Q8TD94 323 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 SLC38A5Q8WUX1 472 aa13.25□□□□□ -0.29
PDLIM7-210ENST00000503827 ZNF566Q969W8 418 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms