RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CENPAP49450 140 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ARL4DP49703 201 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 EFNB2P52799 333 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 RPL27P61353 136 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 MRPS10P82664 201 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 RASGEF1BQ0VAM2 473 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CBFBQ13951 182 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ETFDHQ16134 617 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 LGALSLQ3ZCW2 172 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ASPHD2Q6ICH7 369 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SLC25A25Q6KCM7 469 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 MAMSTRQ6ZN01 415 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 NLRC3Q7RTR2 1065 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF227Q86WZ6 799 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SDR16C5Q8N3Y7 309 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 OR1N1Q8NGS0 311 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 DAZLQ92904 295 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PPP1R14AQ96A00 147 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 NKX3-1Q99801 234 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 OR11A1Q9GZK7 315 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 KCNK15Q9H427 330 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF304Q9HCX3 659 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 EMC3Q9P0I2 261 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 STEAP1Q9UHE8 339 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SCP2D1Q9UJQ7 156 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SLC22A13Q9Y226 551 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 TMED7Q9Y3B3 224 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PCDHGA5Q9Y5G8 931 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PHYHO14832 338 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SLC16A7O60669 478 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PRAF2O60831 178 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 TOXO94900 526 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 PNPP00491 289 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 MT-ATP6P00846 226 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ALDOBP05062 364 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CTLA4P16410 223 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ANXA7P20073 488 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CSNK1EP49674 416 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SLC17A1Q14916 467 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ARHGAP40Q5TG30 622 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 DNM1P46Q6ZS02 220 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SHISA6Q6ZSJ9 500 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 BIVMQ86UB2 503 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CDH24Q86UP0 819 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ADGRG3Q86Y34 549 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF441Q8N8Z8 693 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF680Q8NEM1 530 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 OR51D1Q8NGF3 324 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 OR2T35Q8NGX2 323 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 TSEN15Q8WW01 171 aaKnown RBP8.89□□□□□ -0.99
CLIP1-204ENST00000501271 SEMA4CQ9C0C4 833 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CHRDQ9H2X0 955 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CDCP1Q9H5V8 836 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 NOX3Q9HBY0 568 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 COPS7AQ9UBW8 275 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
CLIP1-204ENST00000501271 CABIN1Q9Y6J0 2220 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 IGLV1-36A0A0B4J1U3 117 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 HSPB2A8KAH6 182 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ADAM10O14672 748 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 FADS1O60427 444 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 PIAS2O75928 621 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 LDOC1O95751 146 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ITGA5P08648 1049 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 SPARCP09486 303 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 FBXO45P0C2W1 286 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 CCKBRP32239 447 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 OR3A3P47888 321 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF81P51508 661 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 POLR2HP52434 150 aaKnown RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 PNLIPRP2P54317 469 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 MFGE8Q08431 387 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 MELKQ14680 651 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 HSPB2Q16082 182 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 C1orf140Q5VVS0 124 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 METTL11BQ5VVY1 283 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 FDX2Q6P4F2 183 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 GLDNQ6ZMI3 551 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 C16orf47Q6ZP98 133 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 SLC29A4Q7RTT9 530 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 MDGA2Q7Z553 956 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 D2HGDHQ8N465 521 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 GPR119Q8TDV5 335 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 NPAS1Q99742 590 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 CA10Q9NS85 328 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 B3GNT2Q9NY97 397 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 VSX1Q9NZR4 365 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 CTSFQ9UBX1 484 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 IGHV3-20A0A0C4DH32 117 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 XRCC3O43542 346 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ICMTO60725 284 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 NOS1APO75052 506 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 CTAG2O75638 210 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 SLC22A5O76082 557 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 MPC2O95563 127 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 IL11P20809 199 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms