RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TMBIM6P55061 237 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CDH11P55287 796 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 DLX5P56178 289 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 EGR4Q05215 589 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF91Q05481 1191 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 PIGFQ07326 219 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 LGALS3BPQ08380 585 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 AIMP2Q13155 320 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CBX3Q13185 183 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TOMM34Q15785 309 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TBCEQ15813 527 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF74Q16587 644 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF829Q3KNS6 432 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ALG10Q5BKT4 473 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC25A53Q5H9E4 307 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 FAM69AQ5T7M9 428 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SYT6Q5T7P8 510 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ABHD17BQ5VST6 288 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 C1orf140Q5VVS0 124 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 UBE2UQ5VVX9 321 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 XAF1Q6GPH4 301 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OR5M10Q6IEU7 315 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SPNS3Q6ZMD2 512 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 LINC00299Q6ZSB3 139 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MEPCEQ7L2J0 689 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC46A3Q7Z3Q1 461 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 NANOGNBQ7Z5D8 188 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CPOQ8IVL8 374 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OR2M3Q8NG83 312 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OR1J4Q8NGS1 313 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OR13F1Q8NGS4 319 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 PAQR8Q8TEZ7 354 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 FAR1Q8WVX9 515 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ABTB1Q969K4 478 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MUL1Q969V5 352 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TMIGD2Q96BF3 282 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OTULINQ96BN8 352 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC25A36Q96CQ1 311 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 RNFT2Q96EX2 444 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 THOC3Q96J01 351 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MRGPRX4Q96LA9 322 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 LURAP1Q96LR2 239 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ERMAPQ96PL5 475 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SIGLEC11Q96RL6 698 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 BCL7BQ9BQE9 202 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MND1Q9BWT6 205 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TAPBPLQ9BX59 468 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CDCA4Q9BXL8 241 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 POTEKPQ9BYX7 375 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 LHPPQ9H008 270 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MCCC2Q9HCC0 563 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 GALNT9Q9HCQ5 603 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 FGF20Q9NP95 211 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ACOT13Q9NPJ3 140 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CMC2Q9NRP2 79 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SACM1LQ9NTJ5 587 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 RHBDL2Q9NX52 303 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 GPR83Q9NYM4 423 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 STMN3Q9NZ72 180 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 DNAJC27Q9NZQ0 273 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CHRNA9Q9UGM1 479 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 WARS2Q9UGM6 360 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TUBD1Q9UJT1 453 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 VDAC3Q9Y277 283 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ERGIC3Q9Y282 383 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 B3GNT3Q9Y2A9 372 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 EXOSC1Q9Y3B2 195 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 IER3IP1Q9Y5U9 82 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CHCHD2Q9Y6H1 151 aaPredicted RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 HIVEP3Q5T1R4 2406 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 FBN1P35555 2871 aaKnown RBP4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 TMEM72A0PK05 275 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 LRRN3E7EW58 273 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 ADAM10O14672 748 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 MYL12BO14950 172 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 ATP6V1G1O75348 118 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 TRIM3O75382 744 aaPredicted RBP4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 CBR3O75828 277 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 PPP1R3DO95685 299 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 MPIG6BO95866 241 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 ABHD16AO95870 558 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 RENP00797 406 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 CD14P08571 375 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 TFPIP10646 304 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 MYL12AP19105 171 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 CNR1P21554 472 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 F8A1P23610 371 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 ITGA3P26006 1051 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 MST1P26927 711 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 PSMB9P28065 219 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 C21orf33P30042 268 aaPredicted RBP4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 HTR1FP30939 366 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 UQCRC1P31930 480 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 IDUAP35475 653 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 AQP2P41181 271 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 MAP2K4P45985 399 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 CYB561P49447 251 aa4.74□□□□□ -1.65
HMGXB4-208ENST00000498325 DSCR4P56555 118 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms