RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EMBQ6PCB8 327 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 NUFIP2Q7Z417 695 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 LIX1Q8N485 282 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 METTL27Q8N6F8 245 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SAMD12Q8N8I0 201 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 NOXO1Q8NFA2 376 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 OR6N2Q8NGY6 317 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 OR5K2Q8NHB8 316 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ING5Q8WYH8 240 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 CHMP6Q96FZ7 201 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ZNF354BQ96LW1 612 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SERPINB11Q96P15 392 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 CYP2S1Q96SQ9 504 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 TMEM59Q9BXS4 323 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SRRQ9GZT4 340 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SLC38A1Q9H2H9 487 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 ELL3Q9HB65 397 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 PATZ1Q9HBE1 687 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 SLC38A10Q9HBR0 1119 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 VCX3AQ9NNX9 186 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 WARS2Q9UGM6 360 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 NAGKQ9UJ70 344 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 RCL1Q9Y2P8 373 aaKnown RBP5.04□□□□□ -1.6
BRCA1-224ENST00000497488 FADS3Q9Y5Q0 445 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 V9GYY9 64 aa5.04□□□□□ -1.6
BRCA1-224ENST00000497488 KIF13BQ9NQT8 1826 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 SAA2-SAA4A0A096LPE2 208 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 IGHV3-20A0A0C4DH32 117 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 A0A0G2JLW4 131 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 IGLON5A6NGN9 336 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PRAMEF26H0Y7S4 382 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PRMT5O14744 637 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PLEKHA8P1O95397 391 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 NADKO95544 446 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 FGGP02679 453 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 C2P06681 752 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PGAM1P18669 254 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 HOXA5P20719 270 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PCK1P35558 622 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PTGDSP41222 190 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 HNRNPA3P51991 378 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 VLDLRP98155 873 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 MTF1Q14872 753 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 FAM189A2Q15884 450 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PGGHGQ32M88 737 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 TRMT5Q32P41 509 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 OR2G6Q5TZ20 316 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 FAM151BQ6UXP7 276 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 DCXRQ7Z4W1 244 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 CMC1Q7Z7K0 106 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 CDRT4Q8N9R6 151 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PRSS33Q8NF86 280 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 OR2L8Q8NGY9 312 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 RFESDQ8TAC1 157 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 C11orf52Q96A22 123 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 RPEQ96AT9 228 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 TMEM80Q96HE8 168 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 MS4A4EQ96PG1 132 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 DRC3Q9H069 523 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 LIME1Q9H400 295 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 ACP6Q9NPH0 428 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 AGPAT4Q9NRZ5 378 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 IMP3Q9NV31 184 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 PAK1IP1Q9NWT1 392 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 HRASLS2Q9NWW9 162 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 CCDC59Q9P031 241 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 B4GALT7Q9UBV7 327 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 UBQLN1Q9UMX0 589 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 MRPS28Q9Y2Q9 187 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 RPL36Q9Y3U8 105 aaKnown RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 HYOU1Q9Y4L1 999 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 N4BP2Q86UW6 1770 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-224ENST00000497488 NRXN2Q9P2S2 1712 aa5.03□□□□□ -1.6
BRCA1-224ENST00000497488 A0A0A6YYH2 397 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 TMEM213A2RRL7 107 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 MYMKA6NI61 221 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 A6NJ64 397 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 F8VP50 259 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 KLRC4-KLRK1H3BQV0 150 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 CCL21O00585 134 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SULT1B1O43704 296 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 ERLIN2O94905 339 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SERPINB2P05120 415 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 FGF1P05230 155 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 BCL3P20749 454 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 TFPI2P48307 235 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 PAX9P55771 341 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 DHODHQ02127 395 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 FADDQ13158 208 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 NECTIN1Q15223 517 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 RGS21Q2M5E4 152 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 QRICH1Q2TAL8 776 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 MORN5Q5VZ52 161 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 FAM219BQ5XKK7 198 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF57Q68EA5 555 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-224ENST00000497488 RFWD3Q6PCD5 774 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 RBMS3Q6XE24 437 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms