RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 HIVEP3Q5T1R4 2406 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 ZNF462Q96JM2 2506 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 IGLV1-36A0A0B4J1U3 117 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 SH3D21A4FU49 640 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 ZNF99A8MXY4 864 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 DENRO43583 198 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 TLX2O43763 284 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 UPK3AO75631 287 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 KRT33AO76009 404 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 NPR2P20594 1047 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 ASCL1P50553 236 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 ZNF84P51523 738 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 ISL1P61371 349 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 CSNK2BP67870 215 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 MRPS34P82930 218 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 GLO1Q04760 184 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 OR7E24Q6IFN5 339 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 WDFY1Q8IWB7 410 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 C8orf59Q8N0T1 100 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 C17orf78Q8N4C9 275 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 TCEANCQ8N8B7 351 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 SDR9C7Q8NEX9 313 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 CYGBQ8WWM9 190 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 MOV10Q9HCE1 1003 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 HINT3Q9NQE9 182 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 KCNG2Q9UJ96 466 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 B9D1Q9UPM9 204 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 LRRC42Q9Y546 428 aa17.4■□□□□ 0.38
SCAMP3-209ENST00000497470 SLC22A31A6NKX4 558 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 PRKYO43930 277 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 SLC2A5P22732 501 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 MYF6P23409 242 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 PEX19P40855 299 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 GUCA1AP43080 201 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 CXCR4P61073 352 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 ROR2Q01974 943 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 CXXC5Q7LFL8 322 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 THAP5Q7Z6K1 395 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 P2RY8Q86VZ1 359 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 CPOQ8IVL8 374 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 OR6V1Q8N148 313 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 ZNF610Q8N9Z0 462 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 SYT14Q8NB59 555 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 RELL2Q8NC24 303 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 MUS81Q96NY9 551 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 NUAK2Q9H093 628 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 C12orf49Q9H741 205 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 MARCH7Q9H992 704 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 CRLF2Q9HC73 371 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 OBP2BQ9NPH6 170 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 H2AFY2Q9P0M6 372 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 GPR52Q9Y2T5 361 aa17.39■□□□□ 0.37
SCAMP3-209ENST00000497470 CLEC18AA5D8T8 446 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 GLCEO94923 617 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 SLC2A10O95528 541 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 CTLA4P16410 223 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 SPI1P17947 270 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 BMP5P22003 454 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 LSM6P62312 80 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 ZNF474Q6S9Z5 364 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 CLEC18BQ6UXF7 455 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 LIX1LQ8IVB5 337 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 GLB1L2Q8IW92 636 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 ENTHD1Q8IYW4 607 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 CLEC18CQ8NCF0 446 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 RPRD1BQ9NQG5 326 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 ZNF226Q9NYT6 803 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 WARS2Q9UGM6 360 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 PRSS50Q9UI38 385 aa17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCAMP3-209ENST00000497470 SPENQ96T58 3664 aaKnown RBP17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 J3QKU1 62 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 SLC16A7O60669 478 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 PLA2G2AP14555 144 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 EDNRAP25101 427 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 LAP3P28838 519 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 CD79BP40259 229 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 HSF2Q03933 536 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 FAPQ12884 760 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 MAD2L1BPQ15013 274 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 TEX30Q5JUR7 227 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 PHYHD1Q5SRE7 291 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 SFRP5Q5T4F7 317 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 LCN1P1Q5VSP4 162 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 FAM27BQ5VT28 67 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 CARD17Q5XLA6 110 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 ANKRD16Q6P6B7 361 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 SYT9Q86SS6 491 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 UBE2J2Q8N2K1 259 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 ZNF433Q8N7K0 673 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 CA5BP1Q8WTZ4 195 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 ITLN2Q8WWU7 325 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 FOXB1Q99853 325 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 NELFAQ9H3P2 528 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 SIAEQ9HAT2 523 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 MRPS18AQ9NVS2 196 aaKnown RBP17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 CLN6Q9NWW5 311 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 UGT2A1Q9Y4X1 527 aa17.37■□□□□ 0.37
SCAMP3-209ENST00000497470 SMNDC1O75940 238 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAMP3-209ENST00000497470 ITGA5P08648 1049 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms