RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PGAM5Q96HS1 289 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 KCNS3Q9BQ31 491 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 ELOVL3Q9HB03 270 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 IL17BQ9UHF5 180 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 MRPS18BQ9Y676 258 aaKnown RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 SLC22A23A1A5C7 686 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 H7C1C5 153 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 SEMA7AO75326 666 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 LCN6P62502 163 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 ALKBH1Q13686 389 aaKnown RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 NDUFA5Q16718 116 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 SLC36A2Q495M3 483 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 XAF1Q6GPH4 301 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 C22orf42Q6IC83 251 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 MZT2BQ6NZ67 158 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 NPEPL1Q8NDH3 523 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 OR5M11Q96RB7 305 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 PLA2G3Q9NZ20 509 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 HHLA2Q9UM44 414 aa7.52□□□□□ -1.21
USP54-215ENST00000497106 COA3Q9Y2R0 106 aaPredicted RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 COL5A1P20908 1838 aaPredicted RBP7.52□□□□□ -1.21
USP54-215ENST00000497106 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 SELENOFO60613 162 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 SOX18P35713 384 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OR2G6Q5TZ20 316 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ZNF433Q8N7K0 673 aaPredicted RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 OR10A2Q9H208 303 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 SMURF1Q9HCE7 757 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 A0A1W2PQL4 384 aaPredicted RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 PMS2P1A4D2B8 440 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 FAM171A2A8MVW0 826 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 CDRT15L2A8MXV6 281 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ZNF878C9JN71 531 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 AQP8O94778 261 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OPN1LWP04000 364 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 RAF1P04049 648 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 UBE2NP61088 152 aaKnown RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 CAMK2BQ13554 666 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 RGS21Q2M5E4 152 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 IDNKQ5T6J7 187 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 SPINK14Q6IE38 97 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 FAM131AQ6UXB0 335 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OR9K2Q8NGE7 335 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 FOXRED1Q96CU9 486 aaPredicted RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 DIRAS2Q96HU8 199 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 TTTY12Q9BZ98 90 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 TPK1Q9H3S4 243 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ADGRL4Q9HBW9 690 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 MOV10Q9HCE1 1003 aaKnown RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 GABRPO00591 440 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 F10P00742 488 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 CD1AP06126 327 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 RAB3BP20337 219 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OR12D2P58182 307 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 MALLQ13021 153 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 RPTNQ6XPR3 784 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 DPY19L4Q7Z388 723 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 PHC2Q8IXK0 858 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ZNF679Q8IYX0 411 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 FTMTQ8N4E7 242 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OPALINQ96PE5 141 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 DOK1Q99704 481 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 GLTPQ9NZD2 209 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 CLEC2DQ9UHP7 191 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ZNF175Q9Y473 711 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ETV2O00321 342 aaPredicted RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 DHHO43323 396 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 QDPRP09417 244 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ACHEP22303 614 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 PTGER4P35408 488 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 LIPAP38571 399 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 NCS1P62166 190 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 MXD1Q05195 221 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 HNRNPA0Q13151 305 aaKnown RBP7.51□□□□□ -1.21
USP54-215ENST00000497106 POU4F3Q15319 338 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 ACSM3Q53FZ2 586 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 MESTQ5EB52 335 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 SULF2Q8IWU5 870 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 EXD3Q8N9H8 876 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OR10D3Q8NH80 312 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OTOSQ8NHW6 89 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 DCBLD2Q96PD2 775 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 HIST1H2AAQ96QV6 131 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 MED18Q9BUE0 208 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 OR51E2Q9H255 320 aa7.51□□□□□ -1.21
USP54-215ENST00000497106 IQCMA0A1B0GVH7 501 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 ZC3H12DA2A288 527 aaKnown RBP7.5□□□□□ -1.21
USP54-215ENST00000497106 OR6C68A6NDL8 312 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 ACOD1A6NK06 481 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 FIGNL2A6NMB9 653 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 ZNF814B7Z6K7 855 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 H0YC42 278 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 BOLA2-SMG1P6H3BVE0 249 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 SCGNO76038 276 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 HPNP05981 417 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 SOX8P57073 446 aa7.5□□□□□ -1.21
USP54-215ENST00000497106 AP3S2P59780 193 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms