RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GLO1Q04760 184 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 UTS2BQ765I0 119 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 LRRTM1Q86UE6 522 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 IZUMO1Q8IYV9 350 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 TCTE3Q8IZS6 198 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ATOH1Q92858 354 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 TMEM106AQ96A25 262 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ARL5BQ96KC2 179 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 GFM1Q96RP9 751 aaKnown RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 BEX2Q9BXY8 128 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 TP63Q9H3D4 680 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ELOVL3Q9HB03 270 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 MYOTQ9UBF9 498 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 NPIPA1Q9UND3 350 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ETV7Q9Y603 341 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ANXA2P2A6NMY6 339 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CENPBD1B2RD01 187 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MS4A18H0YCH9 400 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MEN1O00255 615 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 PDGFBP01127 241 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ANXA2P07355 339 aaKnown RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ADRA2CP18825 462 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MSX1P28360 303 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CCR9P51686 369 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CLDN12P56749 244 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RRAS2P62070 204 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 IFITM2Q01629 132 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ROM1Q03395 351 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ETFDHQ16134 617 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MS4A18Q3C1V0 323 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 FAM69BQ5VUD6 431 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 PEAR1Q5VY43 1037 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OTPQ5XKR4 325 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 FAM205BPQ63HN1 556 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 TIGD3Q6B0B8 471 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 KCTD18Q6PI47 426 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 FCRLAQ7L513 359 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 LINGO2Q7L985 606 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 KRT77Q7Z794 578 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 SIAH3Q8IW03 269 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR10AC1Q8NH08 325 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RNF128Q8TEB7 428 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 TSEN15Q8WW01 171 aaKnown RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 AKAP1Q92667 903 aaKnown RBP eCLIP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RNF170Q96K19 258 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 AUNIPQ9H7T9 357 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 METTL7AQ9H8H3 244 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CHST11Q9NPF2 352 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 SDHAF3Q9NRP4 125 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 HRH3Q9Y5N1 445 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 WIF1Q9Y5W5 379 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 NUBP2Q9Y5Y2 271 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 KIF26BQ2KJY2 2108 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ARPC4-TTLL3A0A0A6YYG9 625 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 D6RAR5 112 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RGS13O14921 159 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR2J2O76002 312 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 YES1P07947 543 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RAB40ALP0C0E4 278 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 PTGDSP41222 190 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MAP2K6P52564 334 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RAB25P57735 213 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 TLE3Q04726 772 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 KLF9Q13886 244 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 EIF2B1Q14232 305 aaKnown RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ODF4Q2M2E3 257 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 TEX30Q5JUR7 227 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 NOXA1Q86UR1 476 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 TMPRSS12Q86WS5 348 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF227Q86WZ6 799 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 KDM8Q8N371 416 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR51A4Q8NGJ6 313 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 OR52N5Q8NH56 324 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 RAB40AQ8WXH6 277 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 MRGPRX4Q96LA9 322 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ULBP3Q9BZM4 244 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 WDR54Q9H977 334 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 AKAP7Q9P0M2 348 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
GARNL3-220ENST00000496711 NXT1Q9UKK6 140 aaKnown RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 COA3Q9Y2R0 106 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-220ENST00000496711 CACNA1CQ13936 2221 aa11.71□□□□□ -0.53
GARNL3-220ENST00000496711 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms