RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CXorf67Q86X51 503 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 DEPDC4Q8N2C3 294 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 TRUB1Q8WWH5 349 aaKnown RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 HDHD5Q9BXW7 423 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 GALNT8Q9NY28 637 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 FKBP7Q9Y680 259 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF99A8MXY4 864 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 KHDRBS3O75525 346 aaKnown RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 ITGA5P08648 1049 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 CAPGP40121 348 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 HSPA13P48723 471 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SLC25A1P53007 311 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SFRP5Q5T4F7 317 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 TCEANCQ8N8B7 351 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 OR8J1Q8NGP2 316 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 OR2T4Q8NH00 348 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SSC4DQ8WTU2 575 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 NSMAFQ92636 917 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 RNASE6Q93091 150 aaKnown RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 APOL4Q9BPW4 351 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 RERGLQ9H628 205 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SRA1Q9HD15 236 aaKnown RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 GPR52Q9Y2T5 361 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 CIB4A0PJX0 185 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 TLX2O43763 284 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 PRKYO43930 277 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 CTLA4P16410 223 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 PSMB1P20618 241 aaKnown RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 GUCA1AP43080 201 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 ADARB1P78563 741 aaKnown RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 EFNB1P98172 346 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 SRSF1Q07955 248 aaKnown RBP eCLIP19.14■□□□□ 0.653e-10■■■■□ 21.5
C9orf3-222ENST00000496567 C9orf135Q5VTT2 229 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 ZBTB46Q86UZ6 589 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF433Q8N7K0 673 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 TMEM163Q8TC26 289 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 KISS1RQ969F8 398 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 OTULINQ96BN8 352 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF837Q96EG3 531 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-222ENST00000496567 TSSK2Q96PF2 358 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 NMNAT2Q9BZQ4 307 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 RACGAP1Q9H0H5 632 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 B9D1Q9UPM9 204 aa19.14■□□□□ 0.65
C9orf3-222ENST00000496567 IGKV1D-43A0A0B4J1Z2 117 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 CLEC18AA5D8T8 446 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 LYZL6O75951 148 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 FOXG1P55316 489 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-222ENST00000496567 OR7E24Q6IFN5 339 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 PLBD1Q6P4A8 553 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 CLEC18BQ6UXF7 455 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 STAC2Q6ZMT1 411 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 CXXC5Q7LFL8 322 aaKnown RBP19.13■□□□□ 0.65
C9orf3-222ENST00000496567 CPOQ8IVL8 374 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 OR6V1Q8N148 313 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 CLEC18CQ8NCF0 446 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 C1orf162Q8NEQ5 155 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-222ENST00000496567 IL4I1Q96RQ9 567 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 FOXB1Q99853 325 aa19.13■□□□□ 0.65
C9orf3-222ENST00000496567 HINT3Q9NQE9 182 aaKnown RBP19.13■□□□□ 0.65
C9orf3-222ENST00000496567 FAM183AA6NL82 134 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 DCTN6O00399 190 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 MPZL2O60487 215 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 ARF1P84077 181 aaKnown RBP19.12■□□□□ 0.65
C9orf3-222ENST00000496567 FAM27E3Q08E93 113 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 IL18R1Q13478 541 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 OR9Q1Q8NGQ5 310 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 TFAP2CQ92754 450 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 PTP4A1Q93096 173 aa19.12■□□□□ 0.65
C9orf3-222ENST00000496567 IGLV1-36A0A0B4J1U3 117 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 C16orf97H3BN30 126 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 M0R129 80 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 SPI1P17947 270 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 NPR2P20594 1047 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 IL32P24001 234 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 GLO1Q04760 184 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 ETFDHQ16134 617 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 NRN1LQ496H8 165 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 ANKRD16Q6P6B7 361 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF627Q7L945 461 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 BHLHA15Q7RTS1 189 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-222ENST00000496567 GLB1L2Q8IW92 636 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 SETD9Q8NE22 299 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 PROKR2Q8NFJ6 384 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 STEAP2Q8NFT2 490 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 OR1K1Q8NGR3 316 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 USB1Q9BQ65 265 aaKnown RBP19.11■□□□□ 0.65
C9orf3-222ENST00000496567 MED20Q9H944 212 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 H2AFY2Q9P0M6 372 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-222ENST00000496567 MOKQ9UQ07 419 aa19.11■□□□□ 0.65
C9orf3-222ENST00000496567 COA3Q9Y2R0 106 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-222ENST00000496567 A0A1W2PPL8 197 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 RAD51DO75771 328 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 LAP3P28838 519 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 UGT2B10P36537 528 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 CENPAP49450 140 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 SNRPGP62308 76 aaKnown RBP19.1■□□□□ 0.65
C9orf3-222ENST00000496567 MRPS34P82930 218 aaKnown RBP19.1■□□□□ 0.65
C9orf3-222ENST00000496567 TFF3Q07654 80 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF691Q5VV52 312 aa19.1■□□□□ 0.65
C9orf3-222ENST00000496567 ZNF813Q6ZN06 617 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms