RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ST6GALNAC2Q9UJ37 374 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 FBXL4Q9UKA2 621 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 HDGFL3Q9Y3E1 203 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NCKAP5O14513 1909 aa6.24□□□□□ -1.41
USP39-219ENST00000496047 NAV2Q8IVL1 2488 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 A0A1W2PNV4 684 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ANXA2P2A6NMY6 339 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 H3BML4 177 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ETV2O00321 342 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 EREGO14944 169 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 MAGEB3O15480 346 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SLC16A7O60669 478 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 HPP00738 406 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 IGHG1P01857 330 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 RAF1P04049 648 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 P04436 131 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CD2P06729 351 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ANXA2P07355 339 aaKnown RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 SPARCP09486 303 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 COX6A1P12074 109 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 IL7P13232 177 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ZNF17P17021 662 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 AZGP1P25311 298 aaKnown RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 OTX2P32243 289 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CASP3P42574 277 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CAPZA1P52907 286 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 DSCR4P56555 118 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 OR2B6P58173 313 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CSNK2A1P68400 391 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 SLC35A1P78382 337 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 HSF1Q00613 529 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 POU3F1Q03052 451 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 LTBQ06643 244 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 DNASE1L3Q13609 305 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SSPNQ14714 243 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TAB1Q15750 504 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PLPPR5Q32ZL2 321 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 Q499Y3 187 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 LINC01590Q5TEZ4 76 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SLC22A10Q63ZE4 541 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PYHIN1Q6K0P9 492 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CNIH2Q6PI25 160 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 KLHL24Q6TFL4 600 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 IL20RBQ6UXL0 311 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TMEM91Q6ZNR0 172 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SLC35D2Q76EJ3 337 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SSX6Q7RTT6 188 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PXKQ7Z7A4 578 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ZNF227Q86WZ6 799 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PLCZ1Q86YW0 608 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 LURAP1LQ8IV03 231 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 OR2M3Q8NG83 312 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 OR10G3Q8NGC4 313 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 OR1J4Q8NGS1 313 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ZNF519Q8TB69 540 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TRMT10AQ8TBZ6 339 aaKnown RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 GPR148Q8TDV2 347 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 TSEN15Q8WW01 171 aaKnown RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 HTRA1Q92743 480 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PGLYRP3Q96LB9 341 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SGCZQ96LD1 299 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 IP6K3Q96PC2 410 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 OR5B2Q96R09 309 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 DDOQ99489 341 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 SPOCK3Q9BQ16 436 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP39-219ENST00000496047 HDHD2Q9H0R4 259 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 MARCH7Q9H992 704 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 GALNT9Q9HCQ5 603 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TMEM9BQ9NQ34 198 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ACOXLQ9NUZ1 547 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 DLL3Q9NYJ7 618 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 TAS2R5Q9NYW4 299 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 EXTL2Q9UBQ6 330 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 CKLFQ9UBR5 152 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 PISDQ9UG56 409 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 KCNG2Q9UJ96 466 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 B9D1Q9UPM9 204 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 RPH3AQ9Y2J0 694 aaPredicted RBP6.23□□□□□ -1.41
USP39-219ENST00000496047 POLR1DQ9Y2S0 133 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 V9GYH0 126 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 ARHGAP21Q5T5U3 1957 aa6.23□□□□□ -1.41
USP39-219ENST00000496047 A0A1W2PQ72 361 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 SLC22A23A1A5C7 686 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 SMIM30A4D0T7 59 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 TVP23AA6NH52 213 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 LIPT2A6NK58 231 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 ZNF726A6NNF4 738 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 FAM171A2A8MVW0 826 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 C21orf140B9A014 251 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 H7C1C5 153 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 SULT2B1O00204 365 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 EIF1BO60739 113 aaKnown RBP6.22□□□□□ -1.41
USP39-219ENST00000496047 HPGDSO60760 199 aa6.22□□□□□ -1.41
USP39-219ENST00000496047 ZNF254O75437 659 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms