RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 C1RLQ9NZP8 487 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 TXNDC16Q9P2K2 825 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 RNF14Q9UBS8 474 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 DKKL1Q9UK85 242 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 ABCG2Q9UNQ0 655 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 GPR132Q9UNW8 380 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 EIF3LQ9Y262 564 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 MRPS18CQ9Y3D5 142 aaKnown RBP3.7□□□□□ -1.82
VPS52-222ENST00000495981 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
VPS52-222ENST00000495981 PLCE1Q9P212 2302 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CADP27708 2225 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 RNF103-CHMP3A0A140T963 221 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 MS4A18H0YCH9 400 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OVOL3O00110 214 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CTDSPLO15194 276 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 SCO2O43819 266 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PCDH7O60245 1069 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 FADS1O60427 444 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CBR3O75828 277 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 KLHL2O95198 593 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CLDN9O95484 217 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PLGP00747 810 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 PDYNP01213 254 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 IGKV1D-16P01601 117 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 SOD3P08294 240 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 IL3P08700 152 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 POU2F1P14859 743 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF17P17021 662 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CSNK2A2P19784 350 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 TNFRSF1BP20333 461 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 DPP4P27487 766 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 MPGP29372 298 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 AGTR1P30556 359 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 SPRP35270 261 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 GCKP35557 465 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 MTCP1P56278 107 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 DSCR4P56555 118 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 PSPHP78330 225 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF155Q12901 538 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 STX5Q13190 355 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PON3Q15166 354 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CTF1Q16619 201 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 BEX5Q5H9J7 111 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 RAET1LQ5VY80 246 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OR5M10Q6IEU7 315 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OR2A2Q6IF42 318 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ETFRF1Q6IPR1 90 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 SCIMPQ6UWF3 145 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 APOOLQ6UXV4 268 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 C12orf54Q6X4T0 127 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF788Q6ZQV5 615 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 C3orf62Q6ZUJ4 267 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 NRARPQ7Z6K4 114 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ADGRG3Q86Y34 549 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 UBQLNLQ8IYU4 475 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 FAM9CQ8IZT9 166 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OR2L13Q8N349 312 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CNEP1R1Q8N9A8 125 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF540Q8NDQ6 660 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OR5M1Q8NGP8 315 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OR6K3Q8NGY3 331 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 RAB3IL1Q8TBN0 382 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 RNF128Q8TEB7 428 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 OIT3Q8WWZ8 545 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 TM4SF18Q96CE8 201 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZBED6CLQ96FA7 236 aaPredicted RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 FAM111AQ96PZ2 611 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF382Q96SR6 550 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ERP44Q9BS26 406 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PINK1Q9BXM7 581 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ACTR6Q9GZN1 396 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 RNPEPL1Q9HAU8 725 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 FAM120CQ9NX05 1096 aaKnown RBP3.69□□□□□ -1.82
VPS52-222ENST00000495981 ELOVL5Q9NYP7 299 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ZNF226Q9NYT6 803 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PRODH2Q9UF12 536 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 BCAP29Q9UHQ4 241 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PYCARDQ9ULZ3 195 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 CFL2Q9Y281 166 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 GRIP1Q9Y3R0 1128 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 ANGPTL3Q9Y5C1 460 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 SAR1BQ9Y6B6 198 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 PCNX3Q9H6A9 2034 aa3.69□□□□□ -1.82
VPS52-222ENST00000495981 IGHV4-28A0A0C4DH34 117 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 TMEM272A0A1B0GTI8 110 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 C16orf97H3BN30 126 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 MANBAO00462 879 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 DVL1O14640 695 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 ZSCAN12O43309 604 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 ITM2AO43736 263 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 GCM2O75603 506 aaPredicted RBP3.68□□□□□ -1.82
VPS52-222ENST00000495981 GLCEO94923 617 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 NDUFB8O95169 186 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 OTCP00480 354 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 IGHV4-39P01824 125 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 NGFRP08138 427 aa3.68□□□□□ -1.82
VPS52-222ENST00000495981 IFI6P09912 130 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms