RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ZNF786Q8N393 782 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 ZIC4Q8N9L1 334 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 C9orf106Q8NAJ2 232 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 NPEPL1Q8NDH3 523 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 LILRB4Q8NHJ6 448 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 HDAC2Q92769 488 aaKnown RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 ZNF775Q96BV0 537 aaPredicted RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 LRRC46Q96FV0 321 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 MRPL48Q96GC5 212 aaKnown RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 PSMG3-AS1Q96PY0 264 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 NR1H4Q96RI1 486 aaPredicted RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 LINC00470Q9BZP3 86 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 SYT4Q9H2B2 425 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 KCNN2Q9H2S1 579 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 PIGMQ9H3S5 423 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 C12orf49Q9H741 205 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 SRA1Q9HD15 236 aaKnown RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 KCNJ16Q9NPI9 418 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 CHCHD3Q9NX63 227 aaKnown RBP8.4□□□□□ -1.06
ACTN4-207ENST00000495553 ZNF226Q9NYT6 803 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 DNAJC27Q9NZQ0 273 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 Q9UFV3 132 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 PROCRQ9UNN8 238 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 MYRFQ9Y2G1 1151 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 PCDHGB1Q9Y5G3 927 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 KIAA1549Q9HCM3 1950 aa8.4□□□□□ -1.06
ACTN4-207ENST00000495553 OR6C68A6NDL8 312 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 FAM183AA6NL82 134 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 PRSS44E7EML9 344 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 H7C1C5 153 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 M0R129 80 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 ENTPD6O75354 484 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.071e-7■■■□□ 15
ACTN4-207ENST00000495553 TOXO94900 526 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 GLCEO94923 617 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 FARS2O95363 451 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 TNFAIP8O95379 198 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 FADS2O95864 444 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 IL18BPO95998 194 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 QDPRP09417 244 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 CCDC159P0C7I6 412 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 ZNF823P16415 610 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 SPI1P17947 270 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 NPR2P20594 1047 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 BMP5P22003 454 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 EEF1B2P24534 225 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 HTR1FP30939 366 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 MTNR1AP48039 350 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 SELENOPP49908 381 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 CHN2P52757 468 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 LCN6P62502 163 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 APOFQ13790 326 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 STK11Q15831 433 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 C6orf141Q5SZD1 244 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 FBXW9Q5XUX1 488 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 PLXDC2Q6UX71 529 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 BEND4Q6ZU67 534 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 MEPCEQ7L2J0 689 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 BPIFB6Q8NFQ5 453 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 OR10H5Q8NGA6 315 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 OR9Q1Q8NGQ5 310 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 CNIH3Q8TBE1 160 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 IPCEF1Q8WWN9 437 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 MYDGFQ969H8 173 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 TMEM54Q969K7 222 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 CDADC1Q9BWV3 514 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 RBM24Q9BX46 236 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 MRPL13Q9BYD1 178 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 NUAK2Q9H093 628 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 CCNB1IP1Q9NPC3 277 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 HINT3Q9NQE9 182 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 ZNF629Q9UEG4 869 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 PLEKHB1Q9UF11 243 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 KLF2Q9Y5W3 355 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
ACTN4-207ENST00000495553 USP9YO00507 2555 aaPredicted RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 SPTAN1Q13813 2472 aaKnown RBP8.39□□□□□ -1.07
ACTN4-207ENST00000495553 DIDO1Q9BTC0 2240 aaKnown RBP8.38□□□□□ -1.07
ACTN4-207ENST00000495553 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
ACTN4-207ENST00000495553 MYO7BQ6PIF6 2116 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 A0A1W2PPL8 197 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 DHHO43323 396 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 ZNF432O94892 652 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 CLDN1O95832 211 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 MYL12AP19105 171 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 LAP3P28838 519 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 GSTT1P30711 240 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 HOXC12P31275 282 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 OR3A2P47893 321 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 EFNB1P98172 346 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 ROR2Q01974 943 aaKnown RBP8.38□□□□□ -1.07
ACTN4-207ENST00000495553 RUNX1T1Q06455 604 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 RAB40BQ12829 278 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 HIST3H3Q16695 136 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 SLC25A35Q3KQZ1 300 aa8.38□□□□□ -1.07
ACTN4-207ENST00000495553 ZNF362Q5T0B9 420 aaPredicted RBP8.38□□□□□ -1.07
ACTN4-207ENST00000495553 AADACL4Q5VUY2 407 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms