RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SNX4O95219 450 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 CLDN9O95484 217 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 TSPAN12O95859 305 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 KRT6AP02538 564 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 GAPDHP04406 335 aaKnown RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 IGHV4-34P06331 123 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 UBTFL1P0CB47 393 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 ICAM2P13598 275 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 CD1CP29017 333 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 IL12AP29459 219 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 PBLDP30039 288 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 TPMTP51580 245 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 SH3BGRP55822 239 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 DLX1P56177 255 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 OGDHQ02218 1023 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 LRRC74AQ0VAA2 488 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 CEP55Q53EZ4 464 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 PHYHD1Q5SRE7 291 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 C6orf89Q6UWU4 347 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 NUDCD3Q8IVD9 361 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 FAM71E2Q8N5Q1 922 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 TMEM158Q8WZ71 300 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 FCRL1Q96LA6 429 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 LINC00167Q96N53 147 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 MS4A4EQ96PG1 132 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 NPY6RQ99463 290 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 PELOQ9BRX2 385 aaKnown RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 HDHD3Q9BSH5 251 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 AZI2Q9H6S1 392 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 NMRAL1Q9HBL8 299 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 MMP26Q9NRE1 261 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 GIN1Q9NXP7 522 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 DEC1Q9P2X7 70 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 SLC7A8Q9UHI5 535 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 ZNF225Q9UK10 706 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 PRG3Q9Y2Y8 225 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 NEUROG3Q9Y4Z2 214 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 ABCC12Q96J65 1359 aa2.95□□□□□ -1.94
SMC4-224ENST00000494612 SIPA1L3O60292 1781 aaPredicted RBP2.95□□□□□ -1.94
SMC4-224ENST00000494612 A0A1B0GUA9 196 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 TRIM49D1C9J1S8 452 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 C12orf77C9JDV5 145 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 HAS3O00219 553 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 CXCL11O14625 94 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 MMP1P03956 469 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 ATP1B2P14415 290 aaPredicted RBP2.94□□□□□ -1.94
SMC4-224ENST00000494612 ETS2P15036 469 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 RCC1P18754 421 aaPredicted RBP2.94□□□□□ -1.94
SMC4-224ENST00000494612 SULT1E1P49888 294 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 SCRN3Q0VDG4 424 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 BST1Q10588 318 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 CTRB2Q6GPI1 263 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 CNIH2Q6PI25 160 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 RNF175Q8N4F7 328 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 PYROXD1Q8WU10 500 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 FBXO32Q969P5 355 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 C12orf42Q96LP6 360 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 NRTNQ99748 197 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 GBA3Q9H227 469 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 EXTL2Q9UBQ6 330 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 SUN2Q9UH99 717 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 ASB3Q9Y575 518 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 HEBP2Q9Y5Z4 205 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 SLC25A15Q9Y619 301 aa2.94□□□□□ -1.94
SMC4-224ENST00000494612 RBBP6Q7Z6E9 1792 aaKnown RBP2.94□□□□□ -1.94
SMC4-224ENST00000494612 RIC1Q4ADV7 1423 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 LAMB4A4D0S4 1761 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 PINLYPA6NC86 204 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 UBXN8O00124 270 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 PALMO75781 387 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 OR7A10O76100 309 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ALDOBP05062 364 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 NCF2P19878 526 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 RPS12P25398 132 aaKnown RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 OPRD1P41143 372 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CCR6P51684 374 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CRYBB1P53674 252 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 MRPL28Q13084 256 aaKnown RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 KIAA0087Q14695 138 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 KCTD21Q4G0X4 260 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ZNF658BQ4V348 819 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 CASC10Q5T4H9 136 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 KDM7AQ6ZMT4 941 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 TIFABQ6ZNK6 161 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 PLA2G4DQ86XP0 818 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 PIANPQ8IYJ0 282 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ZNF433Q8N7K0 673 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 ARIH2OSQ8N7S6 290 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 TPRX1Q8N7U7 411 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 FAM83FQ8NEG4 500 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 IL22RA2Q969J5 263 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 MED8Q96G25 268 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 PLEKHA8Q96JA3 519 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CNN2Q99439 309 aaKnown RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 NRIP2Q9BQI9 281 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 TMEM246Q9BRR3 403 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 SLC39A3Q9BRY0 314 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 OR11A1Q9GZK7 315 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ADAP2Q9NPF8 381 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms