RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 NMNAT1Q9HAN9 279 aaPredicted RBP28.68■■■□□ 2.18
CBX4-203ENST00000494546 FAM32AQ9Y421 112 aaKnown RBP28.68■■■□□ 2.18
CBX4-203ENST00000494546 CMAHPQ9Y471 501 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 CR1P17927 2039 aa28.68■■■□□ 2.18
CBX4-203ENST00000494546 NSD1Q96L73 2696 aaPredicted RBP28.67■■■□□ 2.18
CBX4-203ENST00000494546 SH3PXD2BA1X283 911 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 GPRIN2O60269 458 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 SLC25A16P16260 332 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 TCN1P20061 433 aaPredicted RBP28.67■■■□□ 2.18
CBX4-203ENST00000494546 GPR4P46093 362 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 PPOXP50336 477 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 FMODQ06828 376 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 TAF11Q15544 211 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 SLC36A2Q495M3 483 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 PIGWQ7Z7B1 504 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 NSMAFQ92636 917 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 LRRC37BQ96QE4 947 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 DOK1Q99704 481 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 FBXO9Q9UK97 447 aaPredicted RBP28.67■■■□□ 2.18
CBX4-203ENST00000494546 ZNF346Q9UL40 294 aaKnown RBP28.67■■■□□ 2.18
CBX4-203ENST00000494546 SAMD4AQ9UPU9 718 aaKnown RBP28.67■■■□□ 2.18
CBX4-203ENST00000494546 TLN2Q9Y4G6 2542 aa28.67■■■□□ 2.18
CBX4-203ENST00000494546 ZNF133P52736 654 aaPredicted RBP28.66■■■□□ 2.18
CBX4-203ENST00000494546 RPL27P61353 136 aaKnown RBP28.66■■■□□ 2.18
CBX4-203ENST00000494546 NRN1LQ496H8 165 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 C10orf128Q5T292 105 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 DPPA2Q7Z7J5 298 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 LRRC18Q8N456 261 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 LRRC75AQ8NAA5 344 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 KCNK17Q96T54 332 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 RAB1BQ9H0U4 201 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 DYNLRB1Q9NP97 96 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 DCAF13Q9NV06 445 aaKnown RBP28.66■■■□□ 2.18
CBX4-203ENST00000494546 TAGLN3Q9UI15 199 aa28.66■■■□□ 2.18
CBX4-203ENST00000494546 HIVEP2P31629 2446 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 A0A096LNT2 108 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 TMEM129A0AVI4 362 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 NR2C1P13056 603 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 SLC9A3P48764 834 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 PDLIM4P50479 330 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 CARTPTQ16568 116 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 FAM86B1Q8N7N1 296 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 NMD3Q96D46 503 aaKnown RBP28.65■■■□□ 2.18
CBX4-203ENST00000494546 ANKRD19PQ9H560 264 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 ARL8BQ9NVJ2 186 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 V9GYQ6 96 aa28.65■■■□□ 2.18
CBX4-203ENST00000494546 IGKV1D-43A0A0B4J1Z2 117 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 DCTN3O75935 186 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 IGHMP01871 453 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 H1F0P07305 194 aaKnown RBP28.64■■■□□ 2.18
CBX4-203ENST00000494546 CDAP32320 146 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 FHL1Q13642 323 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 ANKDD1AQ495B1 522 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 PGAM4Q8N0Y7 254 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 ZCCHC24Q8N2G6 241 aaKnown RBP28.64■■■□□ 2.18
CBX4-203ENST00000494546 CLDN22Q8N7P3 220 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 SLC30A7Q8NEW0 376 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 TSPAN32Q96QS1 320 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 ALG12Q9BV10 488 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 SMURF2Q9HAU4 748 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 NDUFAF4Q9P032 175 aa28.64■■■□□ 2.18
CBX4-203ENST00000494546 GLRXP35754 106 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 MSMPQ1L6U9 139 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 FGD3Q5JSP0 725 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 PODNL1Q6PEZ8 512 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 SLC7A13Q8TCU3 470 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 MRPL24Q96A35 216 aaKnown RBP28.63■■■□□ 2.17
CBX4-203ENST00000494546 RBP7Q96R05 134 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 MRPL37Q9BZE1 423 aaKnown RBP28.63■■■□□ 2.17
CBX4-203ENST00000494546 KCNN2Q9H2S1 579 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 SLC7A8Q9UHI5 535 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 UGT2A1Q9Y4X1 527 aa28.63■■■□□ 2.17
CBX4-203ENST00000494546 CDC42EP2O14613 210 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 CD5LO43866 347 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 ERCC1P07992 297 aaPredicted RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 CCL2P13500 99 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 RHCEP18577 417 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 MSX2P35548 267 aaPredicted RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 RPL4P36578 427 aaKnown RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 RPS23P62266 143 aaKnown RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 MRPS34P82930 218 aaKnown RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 LOXL1Q08397 574 aaPredicted RBP28.62■■■□□ 2.17
CBX4-203ENST00000494546 SGCAQ16586 387 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 FAM205BPQ63HN1 556 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 SLC25A47Q6Q0C1 308 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 TMPRSS11FQ6ZWK6 438 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 CDRT15Q96T59 188 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 GORASP2Q9H8Y8 452 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 SIAEQ9HAT2 523 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 CDH20Q9HBT6 801 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 TMEM5Q9Y2B1 443 aa28.62■■■□□ 2.17
CBX4-203ENST00000494546 A6NIZ1 184 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 DIRAS1O95057 198 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 ADRA2AP08913 450 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 HSD17B1P14061 328 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 RAP1BP61224 184 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 RAP1AP62834 184 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 PLP2Q04941 152 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 FXNQ16595 210 aa28.61■■■□□ 2.17
CBX4-203ENST00000494546 THEM4Q5T1C6 240 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms