RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 KPNB1Q14974 876 aaKnown RBP11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CLEC12AQ5QGZ9 265 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 RPL13AP3Q6NVV1 102 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 PTCHD4Q6ZW05 846 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 SKA3Q8IX90 412 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 LILRB1Q8NHL6 650 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-208ENST00000494334 HTRA1Q92743 480 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 IFT27Q9BW83 186 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 PLA2G12AQ9BZM1 189 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 B3GNT2Q9NY97 397 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 UGT2A1Q9Y4X1 527 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CSMD1Q96PZ7 3565 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 IGHV1-18A0A0C4DH31 117 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 BHLHE40O14503 412 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ABCD4O14678 606 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 AHCYL1O43865 530 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 IGKV3-15P01624 115 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 HLA-HP01893 362 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 OR8G3PP0DMU2 310 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 FASP25445 335 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 CDAP32320 146 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 CDKN2AP42771 156 aaKnown RBP11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ARHGDIAP52565 204 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 PIGFQ07326 219 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ATP6AP1Q15904 470 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ETFDHQ16134 617 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 SHQ1Q6PI26 577 aaKnown RBP11.8□□□□□ -0.52
COL1A1-208ENST00000494334 MDP1Q86V88 176 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 PIAS4Q8N2W9 510 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-208ENST00000494334 FAM169BQ8N8A8 192 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 KBTBD8Q8NFY9 601 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 OR8D4Q8NGM9 314 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 FGFBP3Q8TAT2 258 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 LRTOMTQ8WZ04 291 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 NRBF2Q96F24 287 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF75AQ96N20 296 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 SLC38A2Q96QD8 506 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 SYT4Q9H2B2 425 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 NOX3Q9HBY0 568 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-208ENST00000494334 NOTCH2Q04721 2471 aa11.8□□□□□ -0.52
COL1A1-208ENST00000494334 CSMD2Q7Z408 3487 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 IDH3BO43837 385 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 FARS2O95363 451 aaKnown RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 SOX14O95416 240 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 IGLV1-44P01699 117 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 PATE4P0C8F1 98 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 CD79AP11912 226 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 ANXA8P13928 327 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 HIST1H1CP16403 213 aaKnown RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 CTLA4P16410 223 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 NOS3P29474 1203 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 ARR3P36575 388 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 RAB1AP62820 205 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 MRPS34P82930 218 aaKnown RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 SPOCK1Q08629 439 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 GSG1Q2KHT4 349 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 C3orf36Q3SXR2 165 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 FOXL2NBQ6ZUU3 175 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 OR52L1Q8NGH7 329 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 OR4K13Q8NH42 304 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 OR5K1Q8NHB7 308 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 PYDC1Q8WXC3 89 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 NANOS1Q8WY41 292 aaKnown RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 NEUROG1Q92886 237 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 RADILQ96JH8 1075 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 RAB3IPQ96QF0 476 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 TSSK6Q9BXA6 273 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 SEC61A2Q9H9S3 476 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 UBTD1Q9HAC8 227 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 MOV10Q9HCE1 1003 aaKnown RBP11.79□□□□□ -0.52
COL1A1-208ENST00000494334 TBC1D23Q9NUY8 699 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 REV1Q9UBZ9 1251 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 CENPEQ02224 2701 aa11.79□□□□□ -0.52
COL1A1-208ENST00000494334 ABCA12Q86UK0 2595 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 DCHS2Q6V1P9 2916 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 MGRN1O60291 552 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 SLC16A7O60669 478 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 ENTPD5O75356 428 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 UBL3O95164 117 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 CELA3BP08861 270 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 CECR9P0C854 216 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 FCGR1AP12314 374 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 NPR2P20594 1047 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 GIPRP48546 466 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 GABPB1Q06547 395 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-208ENST00000494334 NPRL3Q12980 569 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms