RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 KCTD14Q9BQ13 255 aaPredicted RBP2.8□□□□□ -1.96
SSB-212ENST00000494051 ZSCAN5AQ9BUG6 496 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 MRPL37Q9BZE1 423 aaKnown RBP2.8□□□□□ -1.96
SSB-212ENST00000494051 ULBP2Q9BZM5 246 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 MFFQ9GZY8 342 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 NIPAL2Q9H841 368 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 C12orf10Q9HB07 376 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 DCAF16Q9NXF7 216 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 RABL2AQ9UBK7 228 aaPredicted RBP2.8□□□□□ -1.96
SSB-212ENST00000494051 BLOC1S6Q9UL45 172 aa2.8□□□□□ -1.96
SSB-212ENST00000494051 DDX49Q9Y6V7 483 aaKnown RBP2.8□□□□□ -1.96
SSB-212ENST00000494051 A0A0B4J2A0 478 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 IGHV5-10-1A0A0J9YXX1 117 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 CCL21O00585 134 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 ZNF208O43345 1280 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 MPZL1O95297 269 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 IGHV1-8P0DP01 117 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 SSR1P43307 286 aaKnown RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 YAP1P46937 504 aaKnown RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 CSNK1A1P48729 337 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 ZNF92Q03936 586 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 GALNT17Q6IS24 598 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 LHFPL3Q86UP9 236 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 NBPF5PQ86XG9 351 aaPredicted RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 RGP1Q92546 391 aaPredicted RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 ANP32BQ92688 251 aaKnown RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 TM4SF18Q96CE8 201 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 CNN2Q99439 309 aaKnown RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 FMO2Q99518 471 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 TRIM62Q9BVG3 475 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 RPF2Q9H7B2 306 aaKnown RBP2.79□□□□□ -1.96
SSB-212ENST00000494051 HMG20AQ9NP66 347 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 SHPKQ9UHJ6 478 aa2.79□□□□□ -1.96
SSB-212ENST00000494051 GPATCH8Q9UKJ3 1502 aaKnown RBP2.78□□□□□ -1.96
SSB-212ENST00000494051 IGHV3-74A0A0B4J1X5 117 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 LINC00869P0C866 280 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 CDKN2BP42772 138 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 CDKN1BP46527 198 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 PDK3Q15120 406 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 PRR9Q5T870 116 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
SSB-212ENST00000494051 TRPV1Q8NER1 839 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 OR4S2Q8NH73 311 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 ESR2Q92731 530 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 TMEM54Q969K7 222 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 FOXC2Q99958 501 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 OSBPL11Q9BXB4 747 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 TMEM59Q9BXS4 323 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 SPNS1Q9H2V7 528 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 ISYNA1Q9NPH2 558 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
SSB-212ENST00000494051 MRPS18BQ9Y676 258 aaKnown RBP2.78□□□□□ -1.96
SSB-212ENST00000494051 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 A0A1B0GVL5 298 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 RPL36A-HNRNPH2H7BZ11 118 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 RAD51BO15315 384 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 RRP8O43159 456 aaKnown RBP2.77□□□□□ -1.97
SSB-212ENST00000494051 BCHEP06276 602 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 GNAO1P09471 354 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 CALM1P0DP23 149 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 CALM2P0DP24 149 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 CALM3P0DP25 149 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 SERPINB5P36952 375 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 RFX3P48380 749 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 PHYHD1Q5SRE7 291 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 NTM-AS1Q6ZSK4 140 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 WDR86Q86TI4 376 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 LGI3Q8N145 548 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 STEAP2Q8NFT2 490 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 PLEKHA8Q96JA3 519 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 PSKH2Q96QS6 385 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 GPATCH2LQ9NWQ4 482 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 PIGLQ9Y2B2 252 aa2.77□□□□□ -1.97
SSB-212ENST00000494051 SYNJ2BP-COX16A0A087WUM0 186 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 TRAV39A0A0B4J263 110 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 H0YCG3 227 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 SGK1O00141 431 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 NDC80O14777 642 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 TIMM8AO60220 97 aaPredicted RBP2.76□□□□□ -1.97
SSB-212ENST00000494051 EIF3GO75821 320 aaKnown RBP eCLIP2.76□□□□□ -1.97
SSB-212ENST00000494051 HLA-DPB1P04440 258 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 C2P06681 752 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 POLR2MP0CAP2 368 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 CX3CR1P49238 355 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 ARG2P78540 354 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 TCP10Q12799 353 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 TMED1Q13445 227 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 RABL6Q3YEC7 729 aaPredicted RBP2.76□□□□□ -1.97
SSB-212ENST00000494051 HSP90AB3PQ58FF7 597 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 FAM78AQ5JUQ0 283 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 DNLZQ5SXM8 178 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 DNAJC24Q6P3W2 148 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 LRRC74BQ6ZQY2 392 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 OAFQ86UD1 273 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 EGFL6Q8IUX8 553 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 FAM3DQ96BQ1 224 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 IFT74Q96LB3 600 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 ZNF382Q96SR6 550 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 P2RX4Q99571 388 aa2.76□□□□□ -1.97
SSB-212ENST00000494051 C15orf38-AP3S2A0A0A6YYH1 394 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms