RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 HDHD5Q9BXW7 423 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 NMNAT2Q9BZQ4 307 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 RACGAP1Q9H0H5 632 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 C12orf49Q9H741 205 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 ELOVL5Q9NYP7 299 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 PTPN13Q12923 2485 aa10.98□□□□□ -0.65
SNX17-208ENST00000493711 UBR5O95071 2799 aaPredicted RBP10.98□□□□□ -0.65
SNX17-208ENST00000493711 ZNF407Q9C0G0 2248 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 DHHO43323 396 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 TLX2O43763 284 aaPredicted RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 QDPRP09417 244 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 MPGP29372 298 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 NTF4P34130 210 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 TMED1Q13445 227 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 CRMP1Q14194 572 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 OCLNQ16625 522 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 NRN1LQ496H8 165 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 SLC35D3Q5M8T2 416 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 LCN1P1Q5VSP4 162 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 ZNF691Q5VV52 312 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 NXNL2Q5VZ03 156 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 VWA1Q6PCB0 445 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 USP51Q70EK9 711 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 CXXC5Q7LFL8 322 aaKnown RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 THAP5Q7Z6K1 395 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 ZBTB46Q86UZ6 589 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 CCDC71Q8IV32 467 aaPredicted RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 LILRB4Q8NHJ6 448 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 MCHR2Q969V1 340 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 NMD3Q96D46 503 aaKnown RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 DDOQ99489 341 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 SYT4Q9H2B2 425 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 GPR35Q9HC97 309 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 RPRD1BQ9NQG5 326 aaKnown RBP10.97□□□□□ -0.65
SNX17-208ENST00000493711 SLC7A10Q9NS82 523 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 CLN6Q9NWW5 311 aa10.97□□□□□ -0.65
SNX17-208ENST00000493711 OR6C68A6NDL8 312 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 SLC22A31A6NKX4 558 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 A8MXE2 369 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 EEF1E1-BLOC1S5C9J1V9 151 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 EEF1E1O43324 174 aaKnown RBP10.96□□□□□ -0.65
SNX17-208ENST00000493711 PRKYO43930 277 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 SLC16A7O60669 478 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 UPK3AO75631 287 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 SLC2A10O95528 541 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 NPR2P20594 1047 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 PAX7P23759 505 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 ASCL1P50553 236 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CSNK2BP67870 215 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 IL5RAQ01344 420 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 ROR2Q01974 943 aaKnown RBP10.96□□□□□ -0.65
SNX17-208ENST00000493711 GLO1Q04760 184 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 FAPQ12884 760 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 C6orf52Q5T4I8 152 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 OR7E24Q6IFN5 339 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 SLC25A47Q6Q0C1 308 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 SSX8Q7RTT4 187 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 DPPA2Q7Z7J5 298 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CPOQ8IVL8 374 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 GLB1L2Q8IW92 636 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CCDC36Q8IYA8 594 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 ZNF610Q8N9Z0 462 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CYB561A3Q8NBI2 242 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
SNX17-208ENST00000493711 PROKR2Q8NFJ6 384 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CA5BP1Q8WTZ4 195 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 OTULINQ96BN8 352 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 BOD1Q96IK1 185 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 MUS81Q96NY9 551 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 IL4I1Q96RQ9 567 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 WACQ9BTA9 647 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 NUAK2Q9H093 628 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 CRLF2Q9HC73 371 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 TAS2R16Q9NYV7 291 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 JKAMPQ9P055 326 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.96□□□□□ -0.65
SNX17-208ENST00000493711 B9D1Q9UPM9 204 aa10.96□□□□□ -0.65
SNX17-208ENST00000493711 PRRC2CQ9Y520 2896 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 SH3D21A4FU49 640 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 ZNF99A8MXY4 864 aaPredicted RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 H7C1C5 153 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 DENRO43583 198 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 FARS2O95363 451 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 HRGP04196 525 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 SPI1P17947 270 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 MYF6P23409 242 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 FMO3P31513 532 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 LCN6P62502 163 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 MRPS34P82930 218 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 ADORA2A-AS1P86434 159 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 CEACAM16Q2WEN9 425 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 FBXL19-AS1Q494R0 122 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms