RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRODHO43272 600 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CLDN11O75508 207 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NDUFB6O95139 128 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TBX6O95947 436 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR4A8P0C604 315 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 EPCAMP16422 314 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 MPZP25189 248 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ACVR1BP36896 505 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SCAPQ12770 1279 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SCGB2A2Q13296 93 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SYT14P1Q58G82 188 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF311Q5JNZ3 666 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CLEC12AQ5QGZ9 265 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 LDLRAD2Q5SZI1 272 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 KCTD11Q693B1 232 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 P4HA3Q7Z4N8 544 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 GALNTL5Q7Z4T8 443 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NR2C2APQ86WQ0 139 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF280BQ86YH2 543 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 GID4Q8IVV7 300 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF683Q8IZ20 524 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR13C2Q8NGS9 318 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 LGALS14Q8TCE9 139 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CASTOR1Q8WTX7 329 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF582Q96NG8 517 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR8B4Q96RC9 309 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM106CQ9BVX2 250 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR2J1Q9GZK6 312 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SLC25A31Q9H0C2 315 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CLMPQ9H6B4 373 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RBM22Q9NW64 420 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 MARCH4Q9P2E8 410 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 LPAR3Q9UBY5 353 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TNFSF18Q9UNG2 199 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 AK6Q9Y3D8 172 aaKnown RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 WIF1Q9Y5W5 379 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 COL4A2P08572 1712 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CDH23Q9H251 3354 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TRAV14DV4A0A0A6YYC5 116 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SLC25A17O43808 307 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 DUSP11O75319 330 aaKnown RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NME6O75414 186 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CTSSP25774 331 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NSG1P42857 185 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ID4P47928 161 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 COMPP49747 757 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 LBX1P52954 281 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ATP1B3P54709 279 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SELENOWP63302 87 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SLC7A9P82251 487 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 EFNB1P98172 346 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ID2Q02363 134 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 VAMP3Q15836 100 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RPS26P11Q5JNZ5 115 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 C9orf57Q5W0N0 161 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NIPAL3Q6P499 406 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TNFAIP8L2Q6P589 184 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 HEPN1Q6WQI6 88 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 Q6ZRG5 221 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ACOT1Q86TX2 421 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 LRRC56Q8IYG6 542 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR13C5Q8NGS8 318 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CSGALNACT1Q8TDX6 532 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 NTNG2Q96CW9 530 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 APOLD1Q96LR9 279 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CDC6Q99741 560 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 EBPLQ9BY08 206 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 WWTR1Q9GZV5 400 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 IL21RQ9HBE5 538 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 IL36AQ9UHA7 158 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CDV3Q9UKY7 258 aaKnown RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TIMM10BQ9Y5J6 103 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 MEIS3P1A6NDR6 274 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 C9JQL5 133 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 COCHO43405 550 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 PRH1P02810 166 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 HGFACQ04756 655 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RAB40BQ12829 278 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 C18orf21Q32NC0 220 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SLC22A6Q4U2R8 563 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SOHLH1Q5JUK2 328 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 PSAPL1Q6NUJ1 521 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SYT12Q8IV01 421 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 DEFB106AQ8N104 65 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR4K17Q8NGC6 315 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 OR5AP2Q8NGF4 316 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RHEBL1Q8TAI7 183 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 ABHD3Q8WU67 409 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 SMPDL3AQ92484 453 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 CWH43Q9H720 699 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 RNF186Q9NXI6 227 aa6.27□□□□□ -1.41
VPS13B-205ENST00000493587 TRBC2A0A5B9 178 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 CCL25O15444 150 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 LRP3O75074 770 aa6.26□□□□□ -1.41
VPS13B-205ENST00000493587 WISP3O95389 354 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms