RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 FHAD1B1AJZ9 1412 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 RAB19A4D1S5 217 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 F6UB75 175 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 PLPP1O14494 284 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 EIF3GO75821 320 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 OR1E1P30953 314 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 TNFSF9P41273 254 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 GLP1RP43220 463 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 VDAC2P45880 294 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 RORCP51449 518 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 XRCC4Q13426 336 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ANGPT1Q15389 498 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 SYCP1Q15431 976 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 C11orf71Q6IPW1 123 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 FANK1Q8TC84 345 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 EML4Q9HC35 981 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 DMAP1Q9NPF5 467 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ACP6Q9NPH0 428 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 RBMX2Q9Y388 322 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 AKNAQ7Z591 1439 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 TRAV6A0A075B6T7 132 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 A0A087WYN8 130 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 IGHV7-81A0A0B4J1V7 117 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ZNF816-ZNF321PA0A0X1KG74 233 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 AGPAT2O15120 278 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 SLC19A2O60779 497 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 LSM8O95777 96 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 GPR6P46095 362 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ATP5J2P56134 94 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ATP6V0D1P61421 351 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 PAGE2BQ5JRK9 111 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ASCL4Q6XD76 172 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 RBM45Q8IUH3 476 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 SOSTQ9BQB4 213 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 C20orf85Q9H1P6 137 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 CHMP4BQ9H444 224 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 SIAEQ9HAT2 523 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 NTN4Q9HB63 628 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 QPCTLQ9NXS2 382 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 CALYQ9NYX4 217 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 DCDC2Q9UHG0 476 aa3.58□□□□□ -1.84
VPS13A-212ENST00000493341 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 RCL1Q9Y2P8 373 aaKnown RBP3.58□□□□□ -1.84
VPS13A-212ENST00000493341 MAP3K19Q56UN5 1328 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 CFAP65Q6ZU64 1925 aaKnown RBP3.57□□□□□ -1.84
VPS13A-212ENST00000493341 CENPXA8MT69 81 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 A8MUA0 341 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ETHE1O95571 254 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 IGHV3-13P01766 116 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 GDF1P27539 372 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 BTCP35070 178 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 SLC26A3P40879 764 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 OR3A4PP47883 348 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 SUB1P53999 127 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13A-212ENST00000493341 UGT2B15P54855 530 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 CSNK1G2P78368 415 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 GGTLC2Q14390 218 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ATP6AP1Q15904 470 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 PRR4Q16378 134 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ZC2HC1BQ5TFG8 222 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 C1orf146Q5VVC0 180 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ERICH5Q6P6B1 374 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 TMIGD1Q6UXZ0 262 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 FAM220AQ7Z4H9 259 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ST13P4Q8IZP2 240 aaPredicted RBP3.57□□□□□ -1.84
VPS13A-212ENST00000493341 TMEM252Q8N6L7 170 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 OR10G3Q8NGC4 313 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 OR9G1Q8NH87 305 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ACOT11Q8WXI4 607 aaPredicted RBP3.57□□□□□ -1.84
VPS13A-212ENST00000493341 VGLL1Q99990 258 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 APOL2Q9BQE5 337 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 Q9H3A6 140 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 EXD2Q9NVH0 621 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 CLEC5AQ9NY25 188 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 BTNL2Q9UIR0 455 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 RALGAPA1Q6GYQ0 2036 aa3.57□□□□□ -1.84
VPS13A-212ENST00000493341 IGLV8-61A0A075B6I0 122 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 GSTTP1A0A1W2PQM5 241 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 PDZK1P1A8MUH7 402 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 KRTAP29-1A8MX34 341 aaPredicted RBP3.56□□□□□ -1.84
VPS13A-212ENST00000493341 ERVV-1B6SEH8 477 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 ENTPD5O75356 428 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 AQP2P41181 271 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 BTDP43251 543 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 KCTD19Q17RG1 926 aaPredicted RBP3.56□□□□□ -1.84
VPS13A-212ENST00000493341 TIMM50Q3ZCQ8 353 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 HSP90B2PQ58FF3 399 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 VAX1Q5SQQ9 334 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 ADNP2Q6IQ32 1131 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 ZNF620Q6ZNG0 422 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 PRSS41Q7RTY9 318 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 CDC20BQ86Y33 519 aa3.56□□□□□ -1.84
VPS13A-212ENST00000493341 CCDC71LQ8N9Z2 235 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms