RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 COA3Q9Y2R0 106 aaPredicted RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 RALGAPA1Q6GYQ0 2036 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 FAM240BA0A1B0GVZ2 78 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF432O94892 652 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 UBL3O95164 117 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 COX6A1P12074 109 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NR4A2P43354 598 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 RASGEF1BQ0VAM2 473 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 WDR38Q5JTN6 314 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 UBE2NLQ5JXB2 153 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 RSBN1Q5VWQ0 802 aaPredicted RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 STAC2Q6ZMT1 411 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ESPNLQ6ZVH7 1005 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF679Q8IYX0 411 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 OR10AC1Q8NH08 325 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 CMTM3Q96MX0 182 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF700Q9H0M5 742 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NLKQ9UBE8 527 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 FBXL2Q9UKC9 423 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 V9GY05 133 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 C9J4A7 227 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 HSF1Q00613 529 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 POU3F1Q03052 451 aaPredicted RBP18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 ROM1Q03395 351 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 GLO1Q04760 184 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 ADAMTS14Q8WXS8 1223 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 IMMP1LQ96LU5 166 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 KCNK17Q96T54 332 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 TCF7L1Q9HCS4 588 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 FBXO4Q9UKT5 387 aa18.93■□□□□ 0.62
CCDC88B-208ENST00000492980 A0A0C4DFX4 3053 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 TRBV5-7A0A0A0MS05 114 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 HMX3A6NHT5 357 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 TRAPPC2P0DI81 140 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 TRAPPC2BP0DI82 140 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 PTGS2P35354 604 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 GPR176Q14439 515 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 ASB18Q6ZVZ8 466 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 RNF128Q8TEB7 428 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 C5orf34Q96MH7 638 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 SLITRK2Q9H156 845 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 FANCFQ9NPI8 374 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 B3GALT5Q9Y2C3 310 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 CHCHD2Q9Y6H1 151 aaPredicted RBP18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 COL27A1Q8IZC6 1860 aaPredicted RBP18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 VPS13AQ96RL7 3174 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 CENPBD1B2RD01 187 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 TMEM127O75204 238 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 MPZL1O95297 269 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 ADRA2CP18825 462 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 TCEA1P23193 301 aaKnown RBP18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 DPP4P27487 766 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 CLDN20P56880 219 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 FMODQ06828 376 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 MYBPHQ13203 477 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 FAM205BPQ63HN1 556 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 BAIAP2L2Q6UXY1 529 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 LRRTM1Q86UE6 522 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 OR51A4Q8NGJ6 313 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 GPR148Q8TDV2 347 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 UPRTQ96BW1 309 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 MED29Q9NX70 200 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF221Q9UK13 617 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 CAMK2AQ9UQM7 478 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 HS3ST3B1Q9Y662 390 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 DMDP11532 3685 aa18.92■□□□□ 0.62
CCDC88B-208ENST00000492980 A0A1W2PNV4 684 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 WNT11O96014 354 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 PITPNAQ00169 270 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 C19orf57Q0VDD7 668 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 EIF2B1Q14232 305 aaKnown RBP18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ODF4Q2M2E3 257 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 TEX30Q5JUR7 227 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ATAD3CQ5T2N8 411 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 HACD4Q5VWC8 232 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 DNM1P34Q6PK57 102 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 CMTM4Q8IZR5 234 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF454Q8N9F8 522 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 FADS6Q8N9I5 356 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 WDSUB1Q8N9V3 476 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 DTWD2Q8NBA8 298 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 NECAB3Q96P71 396 aaPredicted RBP18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ABHD6Q9BV23 337 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 SERINC1Q9NRX5 453 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 SLC39A1Q9NY26 324 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ZDBF2Q9HCK1 2354 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 GPR171O14626 319 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 LDOC1O95751 146 aaPredicted RBP18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 RAF1P04049 648 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 ADRB1P08588 477 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 MMP15P51511 669 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 CCR9P51686 369 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 FOXK1P85037 733 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 KCNJ8Q15842 424 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 EXT1Q16394 746 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 KCTD18Q6PI47 426 aaPredicted RBP18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 SLC26A10Q8NG04 563 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 OR5M1Q8NGP8 315 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 OR2Y1Q8NGV0 311 aa18.91■□□□□ 0.62
CCDC88B-208ENST00000492980 YIPF5Q969M3 257 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms