RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 OR2M7Q8NG81 312 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 FNDC9Q8TBE3 224 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CD300LFQ8TDQ1 290 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TSEN15Q8WW01 171 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LRR1Q96L50 414 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 Q96M85 177 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GPER1Q99527 375 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TMED9Q9BVK6 235 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TGIF2Q9GZN2 237 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF700Q9H0M5 742 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 FN3KQ9H479 309 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 OCEL1Q9H607 264 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SIAEQ9HAT2 523 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 FAM118AQ9NWS6 357 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MGAT4CQ9UBM8 478 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF337Q9Y3M9 751 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 UGT2A1Q9Y4X1 527 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MYLKQ15746 1914 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 A0A087WUU8 490 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SERTM1A2A2V5 107 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SLC22A20A6NK97 555 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ATP6V1G2-DDX39BF2Z307 99 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 DOK2O60496 412 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PAHP00439 452 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SERPINA3P01011 423 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 CSN2P05814 226 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 BMP2P12643 396 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 IFNGR1P15260 489 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TBXA2RP21731 343 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 DSCR4P56555 118 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PPP3R1P63098 170 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 DBPQ10586 325 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 MFAP5Q13361 173 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 NTRK2Q16620 822 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 CCDC58Q4VC31 144 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 C1QTNF12Q5T7M4 302 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ARHGAP11AQ6P4F7 1023 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SLC35D2Q76EJ3 337 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ZER1Q7Z7L7 766 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 RHOXF1Q8NHV9 184 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ARL5BQ96KC2 179 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 C7orf34Q96L11 122 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 BCL7BQ9BQE9 202 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 NTN4Q9HB63 628 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 HHATLQ9HCP6 504 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PLEK2Q9NYT0 353 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 CKLFQ9UBR5 152 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 LAMP5Q9UJQ1 280 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ADAM18Q9Y3Q7 739 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TRAV36DV7A0A075B6V5 113 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SMCO3A2RU48 225 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ALG1L2C9J202 215 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 F8W036 122 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SYT5O00445 386 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PDCD5O14737 125 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ARL6IP5O75915 188 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PDGFAP04085 211 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 H2AFB2P0C5Z0 115 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 NR2C1P13056 603 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 CELP19835 753 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 APOBEC1P41238 236 aaKnown RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 OR3A3P47888 321 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 BLOC1S1P78537 153 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TAGLNQ01995 201 aaKnown RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TGFBR3Q03167 851 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SELENBP1Q13228 472 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 MLC1Q15049 377 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SPATS1Q496A3 300 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 LRRC37A5PQ49AS3 106 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 KRBOX4Q5JUW0 171 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PXDC1Q5TGL8 231 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 VASNQ6EMK4 673 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM205Q6UW68 189 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 PAMR1Q6UXH9 720 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF676Q8N7Q3 588 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SAMD12Q8N8I0 201 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 C15orf40Q8WUR7 153 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 NR4A3Q92570 626 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 RASD2Q96D21 266 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 MUCL1Q96DR8 90 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 NMNAT3Q96T66 252 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TTTY12Q9BZ98 90 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 MMP28Q9H239 520 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SYT4Q9H2B2 425 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 OR2S2Q9NQN1 319 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 CD300AQ9UGN4 299 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 GNG8Q9UK08 70 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 LHX6Q9UPM6 363 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 RBM7Q9Y580 266 aaKnown RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 EYSQ5T1H1 3165 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 USF3Q68DE3 2245 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ZC3H12DA2A288 527 aaKnown RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 SMAD9O15198 467 aaKnown RBP4.05□□□□□ -1.76
TRA2B-215ENST00000492417 TBX19O60806 448 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 FCER2P06734 321 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 THBS1P07996 1170 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ADRB1P08588 477 aa4.05□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF35P13682 527 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms