RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 MAKP20794 623 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 GZMKP49863 264 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 ZNF84P51523 738 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 SLC7A2P52569 658 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 SEC24CP53992 1094 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 GALK2Q01415 458 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 FHL1Q13642 323 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 NRN1LQ496H8 165 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 IQCCQ4KMZ1 466 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 C10orf128Q5T292 105 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 GKAP1Q5VSY0 366 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-219ENST00000491183 CBLL1Q75N03 491 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 MEX3DQ86XN8 651 aaKnown RBP15.47■□□□□ 0.07
HMGN1-219ENST00000491183 ARIH2OSQ8N7S6 290 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 LRRC75AQ8NAA5 344 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 ZNF540Q8NDQ6 660 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 UBASH3BQ8TF42 649 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 LZICQ8WZA0 190 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 HOPXQ9BPY8 73 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-219ENST00000491183 SOX7Q9BT81 388 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 RNF121Q9H920 327 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 EFCAB1Q9HAE3 211 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 TMEM160Q9NX00 188 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 SLC7A8Q9UHI5 535 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 UGT2A1Q9Y4X1 527 aa15.47■□□□□ 0.07
HMGN1-219ENST00000491183 FBN1P35555 2871 aaKnown RBP15.47■□□□□ 0.07
HMGN1-219ENST00000491183 LRP5LA4QPB2 252 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 M0R233 179 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 LMX1BO60663 402 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 PRSS23O95084 383 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 SLC2A10O95528 541 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 ERCC1P07992 297 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 MMP7P09237 267 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 ZNF23P17027 643 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 TCN1P20061 433 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 CDAP32320 146 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 ALDH3B1P43353 468 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 GSK3BP49841 420 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 MAD2L1BPQ15013 274 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 SLC36A2Q495M3 483 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 ALG10Q5BKT4 473 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 TMEM53Q6P2H8 277 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 SLC16A14Q7RTX9 510 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 TSEN54Q7Z6J9 526 aaKnown RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 DPPA2Q7Z7J5 298 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 OFCC1Q8IZS5 231 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 LRRC18Q8N456 261 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 SLC30A7Q8NEW0 376 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 TXNIPQ9H3M7 391 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 CDC42EP3Q9UKI2 254 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 ZNF346Q9UL40 294 aaKnown RBP15.46■□□□□ 0.07
HMGN1-219ENST00000491183 CUBNO60494 3623 aa15.46■□□□□ 0.07
HMGN1-219ENST00000491183 HTR3EA5X5Y0 456 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 LILRA1O75019 489 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF682O95780 498 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 IFNW1P05000 195 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 FAM157BP0CG42 384 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 IFNA8P32881 189 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 RPS23P62266 143 aaKnown RBP15.45■□□□□ 0.06
HMGN1-219ENST00000491183 MRPS34P82930 218 aaKnown RBP15.45■□□□□ 0.06
HMGN1-219ENST00000491183 PRKCDQ05655 676 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 FMODQ06828 376 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 RIN1Q13671 783 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 TRAM2Q15035 370 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 ELFN2Q5R3F8 820 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 PODNL1Q6PEZ8 512 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 SLC25A47Q6Q0C1 308 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 HACD2Q6Y1H2 254 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 HDDC2Q7Z4H3 204 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 IGFN1Q86VF2 1251 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 NRMQ8IXM6 262 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 CLDN22Q8N7P3 220 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 RBM15BQ8NDT2 890 aaKnown RBP15.45■□□□□ 0.06
HMGN1-219ENST00000491183 NABP1Q96AH0 204 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 ELAC2Q9BQ52 826 aaKnown RBP15.45■□□□□ 0.06
HMGN1-219ENST00000491183 FNDC11Q9BVV2 318 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 SIAEQ9HAT2 523 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 STX18Q9P2W9 335 aaKnown RBP15.45■□□□□ 0.06
HMGN1-219ENST00000491183 DUSP13Q9UII6 198 aa15.45■□□□□ 0.06
HMGN1-219ENST00000491183 A0A087WUU8 490 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 LOC100289279A0A1B0GTE1 492 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 GSTA4O15217 222 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 MGRN1O60291 552 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 SERPINA1P01009 418 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 IGHMP01871 453 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 HPXP02790 462 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 TACSTD2P09758 323 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 FAM157CP0CG43 387 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 IGFBP5P24593 272 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 LSP1P33241 339 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 CTXN1P60606 82 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 RPL27P61353 136 aaKnown RBP15.44■□□□□ 0.06
HMGN1-219ENST00000491183 TOP3AQ13472 1001 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-219ENST00000491183 IFI44LQ53G44 452 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 TBPL2Q6SJ96 375 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 CXXC5Q7LFL8 322 aaKnown RBP15.44■□□□□ 0.06
HMGN1-219ENST00000491183 CPEB3Q8NE35 698 aaKnown RBP15.44■□□□□ 0.06
HMGN1-219ENST00000491183 OR51A7Q8NH64 312 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 GEMIN6Q8WXD5 167 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms