RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SNX32Q86XE0 403 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 DPP10Q8N608 796 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF519Q8TB69 540 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 NABP1Q96AH0 204 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF416Q9BWM5 594 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 EVA1AQ9H8M9 152 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 NANSQ9NR45 359 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 SELENONQ9NZV5 590 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF229Q9UJW7 825 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF346Q9UL40 294 aaKnown RBP13.22□□□□□ -0.29
COL2A1-207ENST00000490609 SLC7A7Q9UM01 511 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 PCDHB10Q9UN67 800 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 TRIM33Q9UPN9 1127 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 GRIP1Q9Y3R0 1128 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 PRKDCP78527 4128 aaKnown RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 KPNA4O00629 521 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 RNF13O43567 381 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 IGHV3-13P01766 116 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 ADRA2CP18825 462 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 EPHA1P21709 976 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 FUT4P22083 530 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 MMP15P51511 669 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 UGT2B15P54855 530 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 KLF3P57682 345 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 STX1BP61266 288 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 REP15Q6BDI9 236 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF101Q8IZC7 436 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 ZDHHC22Q8N966 263 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 KAT8Q9H7Z6 458 aaKnown RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
COL2A1-207ENST00000490609 WIPI2Q9Y4P8 454 aa13.21□□□□□ -0.29
COL2A1-207ENST00000490609 TRAPPC13A5PLN9 417 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 EVPLLA8MZ36 301 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
COL2A1-207ENST00000490609 TRMUO75648 421 aaKnown RBP13.2□□□□□ -0.3
COL2A1-207ENST00000490609 MPZL1O95297 269 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 F13BP05160 661 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 LCKP06239 509 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 CDAP32320 146 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 MPV17P39210 176 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 RPL18Q07020 188 aaKnown RBP13.2□□□□□ -0.3
COL2A1-207ENST00000490609 RBBP4Q09028 425 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 NRN1LQ496H8 165 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 C10orf128Q5T292 105 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 ARMC4Q5T2S8 1044 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 ACSM5Q6NUN0 579 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
COL2A1-207ENST00000490609 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 NKAIN4Q8IVV8 208 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 LRRC18Q8N456 261 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 SYT14Q8NB59 555 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 PFN4Q8NHR9 129 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 ASB10Q8WXI3 467 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 MARS2Q96GW9 593 aaKnown RBP13.2□□□□□ -0.3
COL2A1-207ENST00000490609 POM121L2Q96KW2 1035 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 CGREF1Q99674 301 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 C20orf141Q9NUB4 165 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 KLHL21Q9UJP4 597 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 CORO2BQ9UQ03 480 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 ANGPT4Q9Y264 503 aa13.2□□□□□ -0.3
COL2A1-207ENST00000490609 IGHV1-69-2A0A0G2JMI3 117 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC22A23A1A5C7 686 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 KCNAB3O43448 404 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 UBOX5O94941 541 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 OR6A2O95222 327 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC2A10O95528 541 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 BCL10O95999 233 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 MAKP20794 623 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 GLO1Q04760 184 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 TSTQ16762 297 aaKnown RBP13.19□□□□□ -0.3
COL2A1-207ENST00000490609 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 TMEM53Q6P2H8 277 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 USP51Q70EK9 711 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC16A14Q7RTX9 510 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-207ENST00000490609 C11orf40Q8WZ69 217 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 DVL3Q92997 716 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC6A7Q99884 636 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC19A3Q9BZV2 496 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 CDH20Q9HBT6 801 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 DCAF16Q9NXF7 216 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 SLC13A4Q9UKG4 626 aa13.19□□□□□ -0.3
COL2A1-207ENST00000490609 BLOC1S5-TXNDC5H3BN57 136 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 IGHG1P01857 330 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 ACADSP16219 412 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 FUT1P19526 365 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 TNFRSF1BP20333 461 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
COL2A1-207ENST00000490609 AQP2P41181 271 aa13.18□□□□□ -0.3
COL2A1-207ENST00000490609 RAD52P43351 418 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms