RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CEACAM8P31997 349 aaPredicted RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 EIF1P41567 113 aaKnown RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 VBP1P61758 197 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 LSM3P62310 102 aaKnown RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 TLE4Q04727 773 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 KRR1Q13601 381 aaKnown RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 SSX1Q16384 188 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 TIMM50Q3ZCQ8 353 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 SLC35D3Q5M8T2 416 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 NSUN5P2Q63ZY6 315 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 LEG1Q6P5S2 330 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 LHFPL3Q86UP9 236 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 DMRTC2Q8IXT2 367 aaPredicted RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 ACBD7Q8N6N7 88 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 OR9Q1Q8NGQ5 310 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 RPL3LQ92901 407 aaKnown RBP13.94□□□□□ -0.18
PCCB-218ENST00000490504 ZBTB8AQ96BR9 441 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 TSPAN32Q96QS1 320 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 NMNAT3Q96T66 252 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 POTEKPQ9BYX7 375 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 GRHPRQ9UBQ7 328 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 AKAP9Q99996 3911 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 PDZD2O15018 2839 aa13.94□□□□□ -0.18
PCCB-218ENST00000490504 OR6C68A6NDL8 312 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 HSPB2A8KAH6 182 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 C12orf71A8MTZ7 269 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SHISA8B8ZZ34 492 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 RNF13O43567 381 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZIC3O60481 467 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 OR6A2O95222 327 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SBK2P0C263 348 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZNF182P17025 639 aaPredicted RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 SPI1P17947 270 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 TCEA1P23193 301 aaKnown RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 ADH6P28332 368 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SRD5A2P31213 254 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 STARP49675 285 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SLC25A1P53007 311 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 GFRA1P56159 465 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 GGTLC2Q14390 218 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 HSPB2Q16082 182 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SLC25A35Q3KQZ1 300 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 OR2G6Q5TZ20 316 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 TMEM99Q8N816 258 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SCAIQ8N9R8 606 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 OR52N1Q8NH53 320 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 TRIB1Q96RU8 372 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZNF587Q96SQ5 575 aaPredicted RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ADGRL4Q9HBW9 690 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 INIPQ9NRY2 104 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SEC14L4Q9UDX3 406 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 C11orf98E9PRG8 122 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 PLPP3O14495 311 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SERPINI2O75830 405 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 TFPIP10646 304 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 CPN1P15169 458 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 GTF2E2P29084 291 aaKnown RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 IDUAP35475 653 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 TIMP3P35625 211 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 CDKN2AP42771 156 aaKnown RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 NCS1P62166 190 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ACTC1P68032 377 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ACTA1P68133 377 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 SRYQ05066 204 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 PON3Q15166 354 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 POMGNT2Q8NAT1 580 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 RELL2Q8NC24 303 aaPredicted RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ATP6V1C2Q8NEY4 427 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 OR10H4Q8NGA5 316 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 NDNFQ8TB73 568 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ZPLD1Q8TCW7 415 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 GATAD2BQ8WXI9 593 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 ASB6Q9NWX5 421 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 NDUFB11Q9NX14 153 aa13.93□□□□□ -0.18
PCCB-218ENST00000490504 CAB39Q9Y376 341 aaPredicted RBP13.93□□□□□ -0.18
PCCB-218ENST00000490504 POLQO75417 2590 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 PHF3Q92576 2039 aaKnown RBP13.92□□□□□ -0.18
PCCB-218ENST00000490504 DAPL1A0PJW8 107 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 CD8B2A6NJW9 211 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 EFNA2O43921 213 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 IGHMP01871 453 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 MRPL3P09001 348 aaKnown RBP13.92□□□□□ -0.18
PCCB-218ENST00000490504 CPEP16870 476 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 BMP5P22003 454 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
PCCB-218ENST00000490504 DPP4P27487 766 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 DIO1P49895 249 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 SNTB1Q13884 538 aaKnown RBP13.92□□□□□ -0.18
PCCB-218ENST00000490504 SF3B4Q15427 424 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■■■□ 24.6
PCCB-218ENST00000490504 OR7A5Q15622 319 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 MESTQ5EB52 335 aa13.92□□□□□ -0.18
PCCB-218ENST00000490504 PLXDC2Q6UX71 529 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms