RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GPX6P59796 221 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 UBE2KP61086 200 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ERVK11-1P61568 191 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EEF1A1P68104 462 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CDKL1Q00532 357 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CYTH1Q15438 398 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM189A2Q15884 450 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 TRIM16LQ309B1 348 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 VWA2Q5GFL6 755 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SAMD4BQ5PRF9 694 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EEF1A1P5Q5VTE0 462 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CST9Q5W186 159 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF57Q68EA5 555 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ULK3Q6PHR2 472 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GCNT7Q6ZNI0 430 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC35D2Q76EJ3 337 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF546Q86UE3 836 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 APOBEC3FQ8IUX4 373 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ITPRIPQ8IWB1 547 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 BPIFB2Q8N4F0 458 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 DHRSXQ8N5I4 330 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF781Q8N8C0 355 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CDRT4Q8N9R6 151 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR10V1Q8NGI7 309 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2L8Q8NGY9 312 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR4Q3Q8NH05 313 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 UBA3Q8TBC4 463 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GATAD1Q8WUU5 269 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 TAF15Q92804 592 aaKnown RBP eCLIP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ISOC2Q96AB3 205 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF501Q96CX3 271 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM122AQ96E09 287 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PRAC1Q96KF2 57 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PPP1R36Q96LQ0 422 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF75AQ96N20 296 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MS4A4EQ96PG1 132 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CSPG4P5Q96PW8 444 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CTRCQ99895 268 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LIME1Q9H400 295 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RANBP3Q9H6Z4 567 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CWH43Q9H720 699 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ANKHQ9HCJ1 492 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NANSQ9NR45 359 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NECAP2Q9NVZ3 263 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PAK1IP1Q9NWT1 392 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SENP1Q9P0U3 644 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RCOR3Q9P2K3 495 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EIF3LQ9Y262 564 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PUS1Q9Y606 427 aaKnown RBP eCLIP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CDH10Q9Y6N8 788 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 URGCP-MRPS24S4R325 110 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CNTNAP1P78357 1384 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MED23Q9ULK4 1368 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 TIAM2Q8IVF5 1701 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 WDR90Q96KV7 1748 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SMCHD1A6NHR9 2005 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HTTP42858 3142 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CENPFP49454 3210 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 AKAP11Q9UKA4 1901 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHV4-61A0A0C4DH41 118 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHV2-70DA0A0C4DH43 119 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KIR2DL5BA0A0G2JN68 375 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KIR2DL5BA0A0G2JPC4 375 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IQANK1A0A1B0GTG1 560 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MSGN1A6NI15 193 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SAGE2PA6NJ88 616 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 E7EWF7 191 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 FAM72CH0Y354 149 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MKRN2OSH3BPM6 223 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KLRC4-KLRK1H3BQV0 150 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PPP1R2P9O14990 202 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 XRCC2O43543 280 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PRKYO43930 277 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EIF4E2O60573 245 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ATP5HO75947 161 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OR7A10O76100 309 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MYO1DO94832 1006 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 ERLIN2O94905 339 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NADKO95544 446 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 OXSR1O95747 527 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHV4-59P01825 116 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 HLA-HP01893 362 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RPN2P04844 631 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KLK1P06870 262 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GATA1P15976 413 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 P2RY2P41231 377 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CCR8P51685 355 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 PRKXP51817 358 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EMP2P54851 167 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 STX17P56962 302 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 C1QTNF8P60827 252 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KDSRQ06136 332 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EIF2B1Q14232 305 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GGTLC2Q14390 218 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 USF2Q15853 346 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KCTD19Q17RG1 926 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 NDUFAF6Q330K2 333 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms