RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 NRN1LQ496H8 165 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 TMEM154Q6P9G4 183 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 ICA1LQ8NDH6 482 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 RBM15BQ8NDT2 890 aaKnown RBP10.57□□□□□ -0.72
CPSF3-204ENST00000489403 NOXO1Q8NFA2 376 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF519Q8TB69 540 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF418Q8TF45 676 aaPredicted RBP10.57□□□□□ -0.72
CPSF3-204ENST00000489403 SNX33Q8WV41 574 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 C11orf40Q8WZ69 217 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 GTF3AQ92664 365 aaKnown RBP10.57□□□□□ -0.72
CPSF3-204ENST00000489403 MCHR2Q969V1 340 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 CGREF1Q99674 301 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 PRSS27Q9BQR3 290 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 TMPRSS13Q9BYE2 586 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 SLC19A3Q9BZV2 496 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 PCDHAC1Q9H158 963 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 MEPEQ9NQ76 525 aaPredicted RBP10.57□□□□□ -0.72
CPSF3-204ENST00000489403 NKIRAS2Q9NYR9 191 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 GPR160Q9UJ42 338 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 PCDHB10Q9UN67 800 aa10.57□□□□□ -0.72
CPSF3-204ENST00000489403 IGHV1-69-2A0A0G2JMI3 117 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 DEAF1O75398 565 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-204ENST00000489403 MPZL1O95297 269 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 PTHP01270 115 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 HIST1H2ABP04908 130 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 F13BP05160 661 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 MMP7P09237 267 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-204ENST00000489403 ANPEPP15144 967 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 RAD52P43351 418 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 COMPP49747 757 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-204ENST00000489403 CRYBA2P53672 197 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 HILS1P60008 231 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 GLO1Q04760 184 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 PCGF3Q3KNV8 242 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 MMEL1Q495T6 779 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 BEND6Q5SZJ8 279 aaPredicted RBP10.56□□□□□ -0.72
CPSF3-204ENST00000489403 ACSM5Q6NUN0 579 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 USP51Q70EK9 711 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 HIST3H2AQ7L7L0 130 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 NANOGNBQ7Z5D8 188 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 LRRC18Q8N456 261 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 DPP10Q8N608 796 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 OR1J2Q8NGS2 313 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 HIST1H2ACQ93077 130 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 TAMM41Q96BW9 452 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 MPP4Q96JB8 637 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 SEPHS2Q99611 448 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 MRPL13Q9BYD1 178 aaKnown RBP10.56□□□□□ -0.72
CPSF3-204ENST00000489403 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 SLCO1C1Q9NYB5 712 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 WIPI2Q9Y4P8 454 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
CPSF3-204ENST00000489403 IQCMA0A1B0GVH7 501 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 CLDN25C9JDP6 229 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 MCIDASD6RGH6 385 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 BLOC1S5-TXNDC5H3BN57 136 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PLPP2O43688 288 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 IGHV2-5P01817 119 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PCGF2P35227 344 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 APLNRP35414 380 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF84P51523 738 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF133P52736 654 aaPredicted RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 ARFIP2P53365 341 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 UGT2B15P54855 530 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 TEKQ02763 1124 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PLP2Q04941 152 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 RPL18Q07020 188 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 TMEM255AQ5JRV8 349 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 AGBL2Q5U5Z8 902 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 USP43Q70EL4 1123 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PATL1Q86TB9 770 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PEG10Q86TG7 708 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 SLC30A8Q8IWU4 369 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 SYT14Q8NB59 555 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 CPEB3Q8NE35 698 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 OR1J1Q8NGS3 322 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 PFN4Q8NHR9 129 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 SLC26A7Q8TE54 656 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 FAM216AQ8WUB2 273 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 ASB10Q8WXI3 467 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 RAB39BQ96DA2 213 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 RABEP2Q9H5N1 569 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 KAT8Q9H7Z6 458 aaKnown RBP10.55□□□□□ -0.72
CPSF3-204ENST00000489403 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
CPSF3-204ENST00000489403 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 IGKV1D-43A0A0B4J1Z2 117 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 A0A0G2JMP0 313 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 A0A0X1KG70 313 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 A0A1W2PRG6 482 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 CENPBD1B2RD01 187 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 TPD52L2O43399 206 aaKnown RBP10.54□□□□□ -0.72
CPSF3-204ENST00000489403 MGRN1O60291 552 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 OR7A10O76100 309 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 SLC2A10O95528 541 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms