RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PNPT1Q8TCS8 783 aaKnown RBP9.51□□□□□ -0.89
HDAC6-233ENST00000489352 SFXN5Q8TD22 340 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 OR5P2Q8WZ92 322 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 METTL2AQ96IZ6 378 aaKnown RBP9.51□□□□□ -0.89
HDAC6-233ENST00000489352 TECTBQ96PL2 329 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 SIGLEC11Q96RL6 698 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 MECRQ9BV79 373 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 DPY30Q9C005 99 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 TCF7L2Q9NQB0 619 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 POLE3Q9NRF9 147 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 BAIAP2L1Q9UHR4 511 aa9.51□□□□□ -0.89
HDAC6-233ENST00000489352 CLDN24A6NM45 220 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 FAAHO00519 579 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 AIM2O14862 343 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 AGR2O95994 175 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 CHRM2P08172 466 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SLC6A2P23975 617 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 HPCAL1P37235 193 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 RPS5P46782 204 aaKnown RBP9.5□□□□□ -0.89
HDAC6-233ENST00000489352 COX10Q12887 443 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SLC36A2Q495M3 483 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 UNC50Q53HI1 259 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 MTX3Q5HYI7 312 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 DPPA2Q7Z7J5 298 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 CALHM3Q86XJ0 350 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 UEVLDQ8IX04 471 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SLC22A24Q8N4F4 322 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 PPP1R35Q8TAP8 253 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 FGFBP3Q8TAT2 258 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SLC25A40Q8TBP6 338 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 KLF14Q8TD94 323 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-233ENST00000489352 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 NPRL2Q8WTW4 380 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 XAGE5Q8WWM1 108 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 CCT7Q99832 543 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 TMEM246Q9BRR3 403 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 EMC6Q9BV81 110 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 RAB18Q9NP72 206 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 MID1IP1Q9NPA3 183 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 SLC17A7Q9P2U7 560 aa9.5□□□□□ -0.89
HDAC6-233ENST00000489352 A0A096LPI6 279 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 EIF3HO15372 352 aaKnown RBP eCLIP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 GSTA1P08263 222 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 MMP9P14780 707 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 EEF1B2P24534 225 aaKnown RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 RPL3P39023 403 aaKnown RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 HSF2Q03933 536 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 SMU1Q2TAY7 513 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 GPAT3Q53EU6 434 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 RUNDC3AQ59EK9 446 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 NKAPLQ5M9Q1 402 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 MBNL2Q5VZF2 373 aaKnown RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 TYW3Q6IPR3 259 aaKnown RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 COMTD1Q86VU5 262 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 RBM15BQ8NDT2 890 aaKnown RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 DDB2Q92466 427 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 SLC35G5Q96KT7 338 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 DCTN5Q9BTE1 182 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 OR2J1Q9GZK6 312 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-233ENST00000489352 ATAD3AQ9NVI7 634 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 C1orf109Q9NX04 203 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 IL19Q9UHD0 177 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 ATP6V1HQ9UI12 483 aa9.49□□□□□ -0.89
HDAC6-233ENST00000489352 LRRC30A6NM36 301 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 C6orf47O95873 294 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 OPN1SWP03999 348 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 NQO1P15559 274 aaKnown RBP9.48□□□□□ -0.89
HDAC6-233ENST00000489352 IL7RP16871 459 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 SDC1P18827 310 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 NPY4RP50391 375 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 ARF6P62330 175 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 EPS8Q12929 822 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 CALCOCO2Q13137 446 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 AP1ARQ63HQ0 302 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 WBP2NLQ6ICG8 309 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 SLC16A14Q7RTX9 510 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 C6orf120Q7Z4R8 191 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 SCAIQ8N9R8 606 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 NKX3-1Q99801 234 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-233ENST00000489352 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 FAM234AQ9H0X4 552 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 SEMA6AQ9H2E6 1030 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
HDAC6-233ENST00000489352 HMX2A2RU54 273 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 C22orf46C9J442 243 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 FBP2O00757 339 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 CYB5R3P00387 301 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-233ENST00000489352 NCF2P19878 526 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-233ENST00000489352 IMPDH1P20839 514 aa9.47□□□□□ -0.89
HDAC6-233ENST00000489352 STOMP27105 288 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms