RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SLC36A2Q495M3 483 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 ARMC4Q5T2S8 1044 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 CLEC2AQ6UVW9 174 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 SKA3Q8IX90 412 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 RBM15BQ8NDT2 890 aaKnown RBP11.71□□□□□ -0.53
LMO4-203ENST00000489303 PYURFQ96I23 114 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 NSL1Q96IY1 281 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 TNFRSF13CQ96RJ3 184 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 ALG12Q9BV10 488 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 MRPL13Q9BYD1 178 aaKnown RBP11.71□□□□□ -0.53
LMO4-203ENST00000489303 ZNF442Q9H7R0 627 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 SEC61A2Q9H9S3 476 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 SMURF2Q9HAU4 748 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 NDUFAF4Q9P032 175 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 FKBP7Q9Y680 259 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 V9GYQ6 96 aa11.71□□□□□ -0.53
LMO4-203ENST00000489303 TRAV27A0A087WT01 109 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 B2RBV5 119 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 PRSS23O95084 383 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 PTHP01270 115 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 ERCC1P07992 297 aaPredicted RBP11.7□□□□□ -0.54
LMO4-203ENST00000489303 NPR2P20594 1047 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 GPR4P46093 362 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
LMO4-203ENST00000489303 PLP2Q04941 152 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 RUNX1T1Q06455 604 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 SNTB2Q13425 540 aaKnown RBP11.7□□□□□ -0.54
LMO4-203ENST00000489303 FXNQ16595 210 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 ZBED5Q49AG3 693 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 C10orf128Q5T292 105 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 PODNL1Q6PEZ8 512 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 TMPRSS11FQ6ZWK6 438 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 FITM2Q8N6M3 262 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 OR13C2Q8NGS9 318 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 SLC7A13Q8TCU3 470 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 SEPHS2Q99611 448 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 SH3GL3Q99963 347 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 C1orf198Q9H425 327 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 NOX3Q9HBY0 568 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 CD300AQ9UGN4 299 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 ZNF346Q9UL40 294 aaKnown RBP11.7□□□□□ -0.54
LMO4-203ENST00000489303 AURKCQ9UQB9 309 aa11.7□□□□□ -0.54
LMO4-203ENST00000489303 CUBNO60494 3623 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 FBN1P35555 2871 aaKnown RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 XKRYO14609 159 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 ARPC2O15144 300 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 IGHMP01871 453 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 SERPINA5P05154 406 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 FABP3P05413 133 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 FUT4P22083 530 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 NR4A1P22736 598 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 THBS4P35443 961 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 MSX2P35548 267 aaPredicted RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 EFNA4P52798 201 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 RPS23P62266 143 aaKnown RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 VLDLRP98155 873 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 HGFACQ04756 655 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 RAB39AQ14964 217 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 EFNB3Q15768 340 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 ADIPOQQ15848 244 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 KRT80Q6KB66 452 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 IGFN1Q86VF2 1251 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 MEX3DQ86XN8 651 aaKnown RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 ARHGAP24Q8N264 748 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 OR1J2Q8NGS2 313 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 OR52J3Q8NH60 311 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 NSMAFQ92636 917 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 HDAC2Q92769 488 aaKnown RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 FAM46AQ96IP4 442 aaKnown RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
LMO4-203ENST00000489303 REG4Q9BYZ8 158 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 LRMDAQ9H2I8 198 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 PLK3Q9H4B4 646 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 SIAEQ9HAT2 523 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 CCNB1IP1Q9NPC3 277 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 GRHPRQ9UBQ7 328 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 CMAHPQ9Y471 501 aa11.69□□□□□ -0.54
LMO4-203ENST00000489303 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 SLC22A23A1A5C7 686 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 DIRAS1O95057 198 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 NDUFB2O95178 105 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 GADD45GO95257 159 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 SLC2A10O95528 541 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 STAMBPO95630 424 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 CD14P08571 375 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 CSF3P09919 207 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 PATE4P0C8F1 98 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 CALB2P22676 271 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 IFNGR2P38484 337 aa11.68□□□□□ -0.54
LMO4-203ENST00000489303 ZNF133P52736 654 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms