RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RHNO1Q9BSD3 238 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 HINT3Q9NQE9 182 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 NDUFB11Q9NX14 153 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 GNG12Q9UBI6 72 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 PCDHB10Q9UN67 800 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 A0A1W2PR48 441 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 C17orf112F2Z3M2 114 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 PGAP1Q75T13 922 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 MARC2Q969Z3 335 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 ZBP1Q9H171 429 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 HIF1ANQ9NWT6 349 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 A3GALT2U3KPV4 340 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TMX2-CTNND1H3BSU7 103 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 LALBAP00709 142 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 ETV6P41212 452 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 CARD18P57730 90 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 OR10A3P58181 314 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 MISPQ8IVT2 679 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 YIPF5Q969M3 257 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TSSK2Q96PF2 358 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 ABHD6Q9BV23 337 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 MUTYHQ9UIF7 546 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 URGCP-MRPS24S4R325 110 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TXNDC12O95881 172 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 CPT2P23786 658 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 TSFMP43897 325 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 RSPO2Q6UXX9 243 aaPredicted RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 EMC6Q9BV81 110 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 PTDSS2Q9BVG9 487 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 GABARAPL1Q9H0R8 117 aa16.17■□□□□ 0.18
NPHP4-209ENST00000489180 EXOSC3Q9NQT5 275 aaKnown RBP16.17■□□□□ 0.18
NPHP4-209ENST00000489180 LPLP06858 475 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 HIST1H1CP16403 213 aaKnown RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ASAH1Q13510 395 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 C5orf46Q6UWT4 87 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 RTN4RL1Q86UN2 441 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OR52H1Q8NGJ2 320 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 GABARAPL3Q9BY60 117 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 THAP10Q9P2Z0 257 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OR6C76A6NM76 312 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ABLIM3O94929 683 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ABHD16AO95870 558 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 RAD52P43351 418 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 MAP2K6P52564 334 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 RTL10Q7L3V2 364 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ZNF808Q8N4W9 903 aaPredicted RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ZDHHC5Q9C0B5 715 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 TAS2R5Q9NYW4 299 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 A8MVM7 634 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ENSAO43768 121 aaKnown RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 CALCBP10092 127 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 TAGLN2P37802 199 aaKnown RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 FAM26DQ5JW98 314 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 LIPNQ5VXI9 398 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 CD300LGQ6UXG3 332 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OVCH1Q7RTY7 1134 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 WDR5BQ86VZ2 330 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OR4A16Q8NH70 328 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM43Q9BTV4 400 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 PPP1R14DQ9NXH3 145 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 CORINQ9Y5Q5 1042 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 C1QBP02746 253 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 ENPP1P22413 925 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 SOX18P35713 384 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 BTG1P62324 171 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 IHHQ14623 411 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 HMGN3Q15651 99 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 METRNLQ641Q3 311 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 RBMS3Q6XE24 437 aaKnown RBP16.16■□□□□ 0.18
NPHP4-209ENST00000489180 OR4Q3Q8NH05 313 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 FGF21Q9NSA1 209 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 FLVCR2Q9UPI3 526 aa16.16■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM221A6NGB7 291 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 H0Y8X5 98 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 TMPRSS11DO60235 418 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 MGST1P10620 155 aaKnown RBP16.15■□□□□ 0.18
NPHP4-209ENST00000489180 EIF4EP06730 217 aaKnown RBP16.15■□□□□ 0.18
NPHP4-209ENST00000489180 FOSL1P15407 271 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 OR1D5P58170 312 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 HBG1P69891 147 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 HBG2P69892 147 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 PXDC1Q5TGL8 231 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 RIMKLAQ8IXN7 391 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 NKAIN3Q8N8D7 197 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 DYNC2LI1Q8TCX1 351 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 TAF9BQ9HBM6 251 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 DYNLRB1Q9NP97 96 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 A0A1B0GTL3 188 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 ZFP92A6NM28 416 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 SOD1P00441 154 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 HMGA1P17096 107 aaKnown RBP16.15■□□□□ 0.18
NPHP4-209ENST00000489180 ADIRFQ15847 76 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 OTPQ5XKR4 325 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 ZNF813Q6ZN06 617 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 TMPRSS7Q7RTY8 843 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 UHRF2Q96PU4 802 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 NPFFR2Q9Y5X5 522 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 ZAR1LA6NP61 321 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms