RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SLC22A20A6NK97 555 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 H3BSA7 217 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 PHYHO14832 338 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 QDPRP09417 244 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 SPARCP09486 303 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 FAM87AP0C7U9 286 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 ZNF823P16415 610 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 CD36P16671 472 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 GUCA1AP43080 201 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 ADAM8P78325 824 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 MLLT11Q13015 90 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 TSTQ16762 297 aaKnown RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 PLEKHN1Q494U1 663 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 FOXB2Q5VYV0 432 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 FAM220AQ7Z4H9 259 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 P4HA3Q7Z4N8 544 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 WDFY1Q8IWB7 410 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TIGD4Q8IY51 512 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TMEM123Q8N131 208 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 ZIC4Q8N9L1 334 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 ZNF420Q8TAQ5 688 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 SMAP2Q8WU79 429 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 RAB2BQ8WUD1 216 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 GATAD2BQ8WXI9 593 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 UFD1Q92890 307 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TMEM45BQ96B21 275 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 ZNF775Q96BV0 537 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 INTS12Q96CB8 462 aaKnown RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 OPALINQ96PE5 141 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TTYH2Q9BSA4 534 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 FUNDC2Q9BWH2 189 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TTTY10Q9BZA0 68 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 PRDM14Q9GZV8 571 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 RBM38Q9H0Z9 239 aaKnown RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 WDR76Q9H967 626 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 MARCH7Q9H992 704 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TRIM36Q9NQ86 728 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 ZNF71Q9NQZ8 489 aaPredicted RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 GLTPQ9NZD2 209 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 TUBD1Q9UJT1 453 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 POLR1DQ9Y2S0 133 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 NOSIPQ9Y314 301 aaKnown RBP8.9□□□□□ -0.98
USP11-211ENST00000489111 CEPT1Q9Y6K0 416 aa8.9□□□□□ -0.98
USP11-211ENST00000489111 OR14I1A6ND48 311 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 J3QLW9 94 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ZNF701M0R085 212 aaPredicted RBP8.89□□□□□ -0.99
USP11-211ENST00000489111 CCRL2O00421 344 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 TMCC2O75069 709 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 KRT33AO76009 404 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 AQP8O94778 261 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 GPANK1O95872 356 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 HRGP04196 525 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SCG5P05408 212 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ZNF19P17023 458 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 LAP3P28838 519 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 LIPAP38571 399 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 RGS6P49758 472 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SELENOPP49908 381 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ENTPD1P49961 510 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ZNF84P51523 738 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 HCCSP53701 268 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 TMBIM6P55061 237 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 TAS2R43P59537 309 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ZNF85Q03923 595 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ETFDHQ16134 617 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 TIMM50Q3ZCQ8 353 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SLC18B1Q6NT16 456 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 PLEKHG7Q6ZR37 379 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 DPY19L4Q7Z388 723 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 CDC20BQ86Y33 519 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 KLBQ86Z14 1044 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SYS1Q8N2H4 156 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ZNF454Q8N9F8 522 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SLC26A10Q8NG04 563 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SPRYD4Q8WW59 207 aaPredicted RBP8.89□□□□□ -0.99
USP11-211ENST00000489111 ASB17Q8WXJ9 295 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 TMEM54Q969K7 222 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 MCHR2Q969V1 340 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ISOC1Q96CN7 298 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 NMD3Q96D46 503 aaKnown RBP8.89□□□□□ -0.99
USP11-211ENST00000489111 YIPF6Q96EC8 236 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 C4orf36Q96KX1 117 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 SEC61A2Q9H9S3 476 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ISYNA1Q9NPH2 558 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 PARPBPQ9NWS1 579 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 ENPP5Q9UJA9 477 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 GNG8Q9UK08 70 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 IKZF2Q9UKS7 526 aa8.89□□□□□ -0.99
USP11-211ENST00000489111 DOCK10Q96BY6 2186 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 IGKV1D-43A0A0B4J1Z2 117 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 A0A1B0GTH9 108 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 MED19A0JLT2 244 aaPredicted RBP8.88□□□□□ -0.99
USP11-211ENST00000489111 OR6C65A6NJZ3 312 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 ZNF724A8MTY0 619 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 TAF4O00268 1085 aa8.88□□□□□ -0.99
USP11-211ENST00000489111 ZNF593O00488 134 aaPredicted RBP8.88□□□□□ -0.99
USP11-211ENST00000489111 MRPL33O75394 65 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms