RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 HSD17B1P14061 328 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 SLC25A16P16260 332 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 RHCEP18577 417 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 GLRXP35754 106 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 EVX1P49640 407 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 CTXN1P60606 82 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 MYBPC1Q00872 1141 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 GALK2Q01415 458 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 DGCR6Q14129 220 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 RAB39AQ14964 217 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 KRT80Q6KB66 452 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 TMPRSS11FQ6ZWK6 438 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 SLC16A14Q7RTX9 510 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 TSEN54Q7Z6J9 526 aaKnown RBP15.1■□□□□ 0.01
ATG3-205ENST00000488910 PGAM4Q8N0Y7 254 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 ANKS4BQ8N8V4 417 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 FAM156AQ8NDB6 213 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 FGFBP3Q8TAT2 258 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 HDAC2Q92769 488 aaKnown RBP15.1■□□□□ 0.01
ATG3-205ENST00000488910 RBP7Q96R05 134 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 TNFRSF13CQ96RJ3 184 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 VRK1Q99986 396 aaPredicted RBP15.1■□□□□ 0.01
ATG3-205ENST00000488910 RAB1BQ9H0U4 201 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 C1orf198Q9H425 327 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 RNF121Q9H920 327 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 SIAEQ9HAT2 523 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 MYOZ1Q9NP98 299 aaPredicted RBP15.1■□□□□ 0.01
ATG3-205ENST00000488910 ZNF346Q9UL40 294 aaKnown RBP15.1■□□□□ 0.01
ATG3-205ENST00000488910 CR1P17927 2039 aa15.1■□□□□ 0.01
ATG3-205ENST00000488910 ABCA1O95477 2261 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 FN1P02751 2386 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 TMEM129A0AVI4 362 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 A6NIZ1 184 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 H1F0P07305 194 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 ERCC1P07992 297 aaPredicted RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 RAP1BP61224 184 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 RPS23P62266 143 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 RAP1AP62834 184 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 MRPS34P82930 218 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 PPP2R2BQ00005 443 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 KRTAP1-1Q07627 177 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 FHL1Q13642 323 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 FXNQ16595 210 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 SPATS1Q496A3 300 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 SAMD4BQ5PRF9 694 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 THEM4Q5T1C6 240 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 GKAP1Q5VSY0 366 aaPredicted RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 TBPL2Q6SJ96 375 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 LRRC75AQ8NAA5 344 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 OR51A7Q8NH64 312 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 C10orf105Q8TEF2 133 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 NMD3Q96D46 503 aaKnown RBP15.09■□□□□ 0.01
ATG3-205ENST00000488910 SORCS2Q96PQ0 1159 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 KCNK17Q96T54 332 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 KCNN2Q9H2S1 579 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 NDE1Q9NXR1 346 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 NDUFAF4Q9P032 175 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 TMEM5Q9Y2B1 443 aa15.09■□□□□ 0.01
ATG3-205ENST00000488910 TRAV27A0A087WT01 109 aa15.08■□□□□ 0
ATG3-205ENST00000488910 SLC22A23A1A5C7 686 aa15.08■□□□□ 0
ATG3-205ENST00000488910 NDUFS8O00217 210 aa15.08■□□□□ 0
ATG3-205ENST00000488910 ITGA2P17301 1181 aa15.08■□□□□ 0
ATG3-205ENST00000488910 PDLIM4P50479 330 aa15.08■□□□□ 0
ATG3-205ENST00000488910 MNAT1P51948 309 aa15.08■□□□□ 0
ATG3-205ENST00000488910 PLP2Q04941 152 aa15.08■□□□□ 0
ATG3-205ENST00000488910 LOXL1Q08397 574 aaPredicted RBP15.08■□□□□ 0
ATG3-205ENST00000488910 CD47Q08722 323 aa15.08■□□□□ 0
ATG3-205ENST00000488910 TOP3AQ13472 1001 aaPredicted RBP15.08■□□□□ 0
ATG3-205ENST00000488910 ZBED5Q49AG3 693 aa15.08■□□□□ 0
ATG3-205ENST00000488910 SLC25A47Q6Q0C1 308 aa15.08■□□□□ 0
ATG3-205ENST00000488910 ZNF584Q8IVC4 421 aa15.08■□□□□ 0
ATG3-205ENST00000488910 SVOPLQ8N434 492 aa15.08■□□□□ 0
ATG3-205ENST00000488910 RNF148Q8N7C7 305 aa15.08■□□□□ 0
ATG3-205ENST00000488910 RBM15BQ8NDT2 890 aaKnown RBP15.08■□□□□ 0
ATG3-205ENST00000488910 OR1J2Q8NGS2 313 aa15.08■□□□□ 0
ATG3-205ENST00000488910 SLC7A13Q8TCU3 470 aa15.08■□□□□ 0
ATG3-205ENST00000488910 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0
ATG3-205ENST00000488910 MRPL24Q96A35 216 aaKnown RBP15.08■□□□□ 0
ATG3-205ENST00000488910 C7orf34Q96L11 122 aa15.08■□□□□ 0
ATG3-205ENST00000488910 CDRT15Q96T59 188 aa15.08■□□□□ 0
ATG3-205ENST00000488910 NDEL1Q9GZM8 345 aa15.08■□□□□ 0
ATG3-205ENST00000488910 ARL8BQ9NVJ2 186 aa15.08■□□□□ 0
ATG3-205ENST00000488910 CD300AQ9UGN4 299 aa15.08■□□□□ 0
ATG3-205ENST00000488910 SLC7A8Q9UHI5 535 aa15.08■□□□□ 0
ATG3-205ENST00000488910 MAGEL2Q9UJ55 1249 aa15.08■□□□□ 0
ATG3-205ENST00000488910 A0A096LNT2 108 aa15.07■□□□□ 0
ATG3-205ENST00000488910 LOC390937A0A1W2PQ73 354 aa15.07■□□□□ 0
ATG3-205ENST00000488910 TLX2O43763 284 aaPredicted RBP15.07■□□□□ 0
ATG3-205ENST00000488910 CD5LO43866 347 aa15.07■□□□□ 0
ATG3-205ENST00000488910 LY6HO94772 140 aa15.07■□□□□ 0
ATG3-205ENST00000488910 SLC2A10O95528 541 aa15.07■□□□□ 0
ATG3-205ENST00000488910 PCSK6P29122 969 aa15.07■□□□□ 0
ATG3-205ENST00000488910 GUCA1AP43080 201 aaPredicted RBP15.07■□□□□ 0
ATG3-205ENST00000488910 KRT72Q14CN4 511 aa15.07■□□□□ 0
ATG3-205ENST00000488910 PODNL1Q6PEZ8 512 aa15.07■□□□□ 0
ATG3-205ENST00000488910 C16orf89Q6UX73 402 aa15.07■□□□□ 0
ATG3-205ENST00000488910 MEX3DQ86XN8 651 aaKnown RBP15.07■□□□□ 0
ATG3-205ENST00000488910 SLC30A7Q8NEW0 376 aa15.07■□□□□ 0
ATG3-205ENST00000488910 OR13C2Q8NGS9 318 aa15.07■□□□□ 0
ATG3-205ENST00000488910 ZNF519Q8TB69 540 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms