RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CPOQ8IVL8 374 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 ENTHD1Q8IYW4 607 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 C8orf59Q8N0T1 100 aaPredicted RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 BBS1Q8NFJ9 593 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 OR51L1Q8NGJ5 315 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 OR6K6Q8NGW6 343 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 FNDC8Q8TC99 324 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 MUS81Q96NY9 551 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 HCAR1Q9BXC0 346 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 SRA1Q9HD15 236 aaKnown RBP10.86□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF226Q9NYT6 803 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 DNAJC27Q9NZQ0 273 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 AASSQ9UDR5 926 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 MALT1Q9UDY8 824 aa10.86□□□□□ -0.67
TRAIP-209ENST00000488860 RELNP78509 3460 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 NKX2-6A6NCS4 301 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 DCTN6O00399 190 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 MSTNO14793 375 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 DHHO43323 396 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 AHCYL1O43865 530 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 KHDRBS3O75525 346 aaKnown RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 LYZL6O75951 148 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 GPANK1O95872 356 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 HLA-DQA2P01906 255 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 SPI1P17947 270 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 CRABP1P29762 137 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 CDAP32320 146 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 ASCL1P50553 236 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 IL18R1Q13478 541 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 APOFQ13790 326 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 TSC22D1Q15714 1073 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 ETFDHQ16134 617 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 HIST3H3Q16695 136 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 SLC25A35Q3KQZ1 300 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF362Q5T0B9 420 aaPredicted RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 SLC25A47Q6Q0C1 308 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 Q6ZT83 130 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 OR6V1Q8N148 313 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 OR8J1Q8NGP2 316 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 OR2T4Q8NH00 348 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 HTRA1Q92743 480 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 TFAP2CQ92754 450 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 NMD3Q96D46 503 aaKnown RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF837Q96EG3 531 aaPredicted RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 CNBD2Q96M20 576 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 Q9H521 79 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 SEC61A2Q9H9S3 476 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 H2AFY2Q9P0M6 372 aaPredicted RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 RAB26Q9ULW5 256 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 B9D1Q9UPM9 204 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 COA3Q9Y2R0 106 aaPredicted RBP10.85□□□□□ -0.67
TRAIP-209ENST00000488860 FKBP7Q9Y680 259 aa10.85□□□□□ -0.67
TRAIP-209ENST00000488860 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 CIB4A0PJX0 185 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 J3QKU1 62 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 MPZL2O60487 215 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 RAD51DO75771 328 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 AGFG2O95081 481 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 ITGA5P08648 1049 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 B4GALT1P15291 398 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 MPGP29372 298 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 SLC25A1P53007 311 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 MAD2L1BPQ15013 274 aaPredicted RBP10.84□□□□□ -0.67
TRAIP-209ENST00000488860 CDSNQ15517 529 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 C10orf128Q5T292 105 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 OTPQ5XKR4 325 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
TRAIP-209ENST00000488860 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 ZNF808Q8N4W9 903 aaPredicted RBP10.84□□□□□ -0.67
TRAIP-209ENST00000488860 CNIH3Q8TBE1 160 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 ITLN2Q8WWU7 325 aaPredicted RBP10.84□□□□□ -0.67
TRAIP-209ENST00000488860 FOXB1Q99853 325 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 RACGAP1Q9H0H5 632 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 CLN6Q9NWW5 311 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 GALNT8Q9NY28 637 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
TRAIP-209ENST00000488860 A0A096LPE4 126 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 TVP23AA6NH52 213 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 A8MXE2 369 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF99A8MXY4 864 aaPredicted RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 RPL36A-HNRNPH2H7BZ11 118 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 CNOT4O95628 575 aaKnown RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 COX5AP20674 150 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 IL32P24001 234 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 GUCA1AP43080 201 aaPredicted RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 NUDT6P53370 316 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 CDH11P55287 796 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 SH3BGRP55822 239 aaPredicted RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 SNRPGP62308 76 aaKnown RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
TRAIP-209ENST00000488860 STK11Q15831 433 aa10.83□□□□□ -0.68
TRAIP-209ENST00000488860 SGCAQ16586 387 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms