RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ATP12AP54707 1039 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 LMO4P61968 165 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 ADARB1P78563 741 aaKnown RBP2.84□□□□□ -1.95
HFM1-208ENST00000488023 ECH1Q13011 328 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 PSMD5Q16401 504 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 VAX1Q5SQQ9 334 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 TPRG1LQ5T0D9 272 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 GFI1BQ5VTD9 330 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 Q6ZN92 141 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 GPRIN3Q6ZVF9 776 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 PLCZ1Q86YW0 608 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 C9orf40Q8IXQ3 194 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 SPAG16Q8N0X2 631 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 FTMTQ8N4E7 242 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 ZNF557Q8N988 423 aaPredicted RBP2.84□□□□□ -1.95
HFM1-208ENST00000488023 CDRT4Q8N9R6 151 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 DNAAF3Q8N9W5 541 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 OR4Q3Q8NH05 313 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 LGALS14Q8TCE9 139 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 ACER1Q8TDN7 264 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 MRGPRDQ8TDS7 321 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 MED8Q96G25 268 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 COL21A1Q96P44 957 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 CTRCQ99895 268 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 ANGPTL4Q9BY76 406 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 TMEM38AQ9H6F2 299 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 WDR55Q9H6Y2 383 aaPredicted RBP2.84□□□□□ -1.95
HFM1-208ENST00000488023 UBE2ZQ9H832 354 aaPredicted RBP2.84□□□□□ -1.95
HFM1-208ENST00000488023 QPCTLQ9NXS2 382 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 PLLPQ9Y342 182 aa2.84□□□□□ -1.95
HFM1-208ENST00000488023 SBNO1A3KN83 1393 aa2.84□□□□□ -1.96
HFM1-208ENST00000488023 ANKRD30BQ9BXX2 1392 aa2.84□□□□□ -1.96
HFM1-208ENST00000488023 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 MEIOCA2RUB1 952 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 FAM172BPA6NC97 362 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 RBMY1BA6NDE4 496 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 RBMY1EA6NEQ0 496 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 TVP23AA6NH52 213 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 SAP18O00422 153 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 NTN3O00634 580 aaPredicted RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 TNFSF11O14788 317 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 MRPS12O15235 138 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 LMX1BO60663 402 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 CRTAPO75718 401 aaPredicted RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 ZNF432O94892 652 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 LSM8O95777 96 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 LALBAP00709 142 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 KLK3P07288 261 aaPredicted RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 RBMY1DP0C7P1 496 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 RBMY1A1P0DJD3 496 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 FOLR1P15328 257 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 TEAD1P28347 426 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 GCKP35557 465 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 UGT2B10P36537 528 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 MAGEA6P43360 314 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 BLVRAP53004 296 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 MLF1P58340 268 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 SP4Q02446 784 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 PDIA2Q13087 525 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 MAPRE2Q15555 327 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 LTB4RQ15722 352 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 KCTD19Q17RG1 926 aaPredicted RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 PARP15Q460N3 678 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 EOGTQ5NDL2 527 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 PTRHD1Q6GMV3 140 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 C12orf54Q6X4T0 127 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 PLA2G4DQ86XP0 818 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 NRMQ8IXM6 262 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 TMEM239Q8WW34 195 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 OR8D1Q8WZ84 308 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 CDKL2Q92772 493 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 EEF1AKMT3Q96AZ1 226 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 CENPNQ96H22 339 aaPredicted RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 ITCHQ96J02 903 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 PGLYRP4Q96LB8 373 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 ZNF75AQ96N20 296 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 SERPINB12Q96P63 405 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 LGMNQ99538 433 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 FOXC2Q99958 501 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 C7orf50Q9BRJ6 194 aaKnown RBP2.83□□□□□ -1.96
HFM1-208ENST00000488023 NAT9Q9BTE0 207 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 MMP28Q9H239 520 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 FOLH1BQ9HBA9 442 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 SIRT7Q9NRC8 400 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 NDE1Q9NXR1 346 aa2.83□□□□□ -1.96
HFM1-208ENST00000488023 PUS1Q9Y606 427 aaKnown RBP eCLIP2.83□□□□□ -1.968e-13■■■□□ 17.8
HFM1-208ENST00000488023 A0A087X002 238 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 ZNF816-ZNF321PA0A0X1KG74 233 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 F6UB75 175 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 RNASEK-C17orf49H0YIS7 233 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 H3BN98 237 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 M0QXV9 152 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 SLC17A2O00624 439 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 DYNC1I1O14576 645 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 ITGB1BP1O14713 200 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 ZMPSTE24O75844 475 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 CATP04040 527 aaKnown RBP2.82□□□□□ -1.96
HFM1-208ENST00000488023 STSP08842 583 aa2.82□□□□□ -1.96
HFM1-208ENST00000488023 LAMP1P11279 417 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms