RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 OR5I1Q13606 314 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 SMARCD3Q6STE5 483 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 UTS2BQ765I0 119 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 PLA2G4DQ86XP0 818 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 TMEM105Q8N8V8 129 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 FAM133AQ8N9E0 248 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 NOXO1Q8NFA2 376 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 OR5M1Q8NGP8 315 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 CCDC110Q8TBZ0 833 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 MED8Q96G25 268 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 TGM7Q96PF1 710 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 MCCC2Q9HCC0 563 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 PIPOXQ9P0Z9 390 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 CHRNA9Q9UGM1 479 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 AURKCQ9UQB9 309 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 POLDIP2Q9Y2S7 368 aa1.21□□□□□ -2.22
SMC4-219ENST00000487747 MRPS18BQ9Y676 258 aaKnown RBP1.21□□□□□ -2.22
SMC4-219ENST00000487747 ZNF726A6NNF4 738 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 ZNF716A6NP11 495 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 A8MUI8 341 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 HIDE1A8MVS5 230 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 A8MXQ7 604 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 PRKAB2O43741 272 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 TBX19O60806 448 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 YIF1AO95070 293 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 IGLV6-57P01721 117 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 LAP3P28838 519 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 RGS4P49798 205 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 BPIFB3P59826 476 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 PRKCDQ05655 676 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 NCBP1Q09161 790 aaKnown RBP1.2□□□□□ -2.22
SMC4-219ENST00000487747 KLRB1Q12918 225 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 ZNF235Q14590 738 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 GANABQ14697 944 aaKnown RBP1.2□□□□□ -2.22
SMC4-219ENST00000487747 RABL6Q3YEC7 729 aaPredicted RBP1.2□□□□□ -2.22
SMC4-219ENST00000487747 ZNF683Q8IZ20 524 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 ANKFN1Q8N957 763 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 OR13G1Q8NGZ3 307 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 OR4S2Q8NH73 311 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 OSBPL10Q9BXB5 764 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 RPH3ALQ9UNE2 315 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 SIGLEC7Q9Y286 467 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 TIMM10BQ9Y5J6 103 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 PNPLA6Q8IY17 1366 aa1.2□□□□□ -2.22
SMC4-219ENST00000487747 CCDC182A6NF36 153 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 ZNF98A6NK75 572 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 IDH1O75874 414 aaKnown RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 TSPOAP1O95153 1857 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 ZNF735P0CB33 412 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 TNFSF9P41273 254 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 ACAA2P42765 397 aaKnown RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 TNFRSF9Q07011 255 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 RGNQ15493 299 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 SLC36A3Q495N2 470 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 DMRTC1Q5HYR2 192 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 TTC23Q5W5X9 447 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 BLOC1S2Q6QNY1 142 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 ABHD13Q7L211 337 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 CALHM1Q8IU99 346 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 FLYWCH2Q96CP2 140 aaKnown RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 DNAJC1Q96KC8 554 aaKnown RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 THUMPD2Q9BTF0 503 aaKnown RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 LRRN3Q9H3W5 708 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 RWDD1Q9H446 243 aaPredicted RBP1.19□□□□□ -2.22
SMC4-219ENST00000487747 GORASP2Q9H8Y8 452 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 PALMDQ9NP74 551 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 ADAP2Q9NPF8 381 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 UFSP2Q9NUQ7 469 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 SMOXQ9NWM0 555 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 TMCO1Q9UM00 188 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 THADAQ6YHU6 1953 aa1.19□□□□□ -2.22
SMC4-219ENST00000487747 K7EPI3 171 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 BPY2O14599 106 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 PRRG1O14668 218 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 ANGPT2O15123 496 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 SOCS1O15524 211 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 RAMP3O60896 148 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 IQCF3P0C7M6 154 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 EPB41P11171 864 aaKnown RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 TCN1P20061 433 aaPredicted RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 RDXP35241 583 aaKnown RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 RORAP35398 523 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 CHI3L1P36222 383 aaPredicted RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 OPRD1P41143 372 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 CBX1P83916 185 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 IFT88Q13099 833 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 MAB21L1Q13394 359 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 PON2Q15165 354 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 USH1GQ495M9 461 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 C10orf120Q5SQS8 335 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 TMEM136Q6ZRR5 245 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 CCDC80Q76M96 950 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 ADM2Q7Z4H4 148 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 OR2T34Q8NGX1 318 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 LILRB4Q8NHJ6 448 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 CTNNBL1Q8WYA6 563 aaPredicted RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 UBE2E3Q969T4 207 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 SLC25A46Q96AG3 418 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 DTNBP1Q96EV8 351 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 STACQ99469 402 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms