RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 TRRAPQ9Y4A5 3859 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 FMO6PO60774 539 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SNAP29O95721 258 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 MMP7P09237 267 aaPredicted RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 ASAH2BP0C7U1 165 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 MAKP20794 623 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 PPIBP23284 216 aaKnown RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 RAD52P43351 418 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SELENOVP59797 346 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SCGB2A2Q13296 93 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SELPLGQ14242 412 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SPRNQ5BIV9 151 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 TMEM53Q6P2H8 277 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 SLC16A14Q7RTX9 510 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 MRPL13Q9BYD1 178 aaKnown RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
SRRT-212ENST00000487311 GPR160Q9UJ42 338 aa13.75□□□□□ -0.21
SRRT-212ENST00000487311 A0A0G2JMP0 313 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 A0A0X1KG70 313 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 ERLIN1O75477 346 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 FARS2O95363 451 aaKnown RBP13.74□□□□□ -0.21
SRRT-212ENST00000487311 BCL10O95999 233 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 IGHV3-13P01766 116 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 STX1BP61266 288 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 TBC1D28Q2M2D7 210 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 AGKQ53H12 422 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
SRRT-212ENST00000487311 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 SYT14Q8NB59 555 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 OR4M2Q8NGB6 313 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 OR1J1Q8NGS3 322 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 VANGL1Q8TAA9 524 aaPredicted RBP13.74□□□□□ -0.21
SRRT-212ENST00000487311 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 SNX33Q8WV41 574 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 CCL17Q92583 94 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 ZMYND19Q96E35 227 aaPredicted RBP13.74□□□□□ -0.21
SRRT-212ENST00000487311 PRSS27Q9BQR3 290 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 ZNF426Q9BUY5 554 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 BCL2L14Q9BZR8 327 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 SLCO1B3Q9NPD5 702 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 MEPEQ9NQ76 525 aaPredicted RBP13.74□□□□□ -0.21
SRRT-212ENST00000487311 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 NKIRAS1Q9NYS0 192 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 SLC7A7Q9UM01 511 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
SRRT-212ENST00000487311 IGKV1D-43A0A0B4J1Z2 117 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 EVPLLA8MZ36 301 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 BLOC1S5-TXNDC5H3BN57 136 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 SPRY3O43610 288 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 TRMUO75648 421 aaKnown RBP13.73□□□□□ -0.21
SRRT-212ENST00000487311 FSHBP01225 129 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 IGHV1-46P01743 117 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 F13BP05160 661 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 CCNOP22674 350 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 CDAP32320 146 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 MPV17P39210 176 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 WNT5AP41221 380 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 MMP15P51511 669 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 TEKQ02763 1124 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 SLC36A2Q495M3 483 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 PABPC1L2AQ5JQF8 200 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 SPATA46Q5T0L3 261 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 THEM4Q5T1C6 240 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 DCAF12L2Q5VW00 463 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 ZNF101Q8IZC7 436 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 RBM15BQ8NDT2 890 aaKnown RBP13.73□□□□□ -0.21
SRRT-212ENST00000487311 OR1J2Q8NGS2 313 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
SRRT-212ENST00000487311 RAB39BQ96DA2 213 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 SUCNR1Q9BXA5 334 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 C1QTNF5Q9BXJ0 243 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 C7orf69Q9H7B7 122 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 EVA1AQ9H8M9 152 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 PCDHGB1Q9Y5G3 927 aa13.73□□□□□ -0.21
SRRT-212ENST00000487311 MEGF8Q7Z7M0 2845 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 LOC100509620A0A075B734 347 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 IQCMA0A1B0GVH7 501 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 CLDN25C9JDP6 229 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 J3QLI3 93 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
SRRT-212ENST00000487311 TPD52L2O43399 206 aaKnown RBP13.72□□□□□ -0.21
SRRT-212ENST00000487311 MGRN1O60291 552 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 UBOX5O94941 541 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 TGDSO95455 350 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 PTHP01270 115 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 IGHG1P01857 330 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 CD247P20963 164 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 ZFP36P26651 326 aaKnown RBP13.72□□□□□ -0.21
SRRT-212ENST00000487311 LIMS1P48059 325 aa13.72□□□□□ -0.21
SRRT-212ENST00000487311 ZNF81P51508 661 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms