RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FPR2P25090 351 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 AQP1P29972 269 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 MAGOHP61326 146 aaKnown RBP16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 LCN2P80188 198 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 MOGQ16653 247 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 SLC36A2Q495M3 483 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 LRIF1Q5T3J3 769 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 LINC00114Q6XXX2 140 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 SLC16A14Q7RTX9 510 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 RETREG3Q86VR2 466 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 OR1J2Q8NGS2 313 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 ELMOD3Q96FG2 381 aa16.51■□□□□ 0.23
SMPDL3A-202ENST00000487215 RNF13O43567 381 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 PTHP01270 115 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 IGHV3-13P01766 116 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 QDPRP09417 244 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF81P51508 661 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 STX1BP61266 288 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 SCARB2Q14108 478 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF74Q16587 644 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 SIGLECL1Q8N7X8 197 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 RBM15BQ8NDT2 890 aaKnown RBP16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 BHLHE22Q8NFJ8 381 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 OR1J1Q8NGS3 322 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 CCL17Q92583 94 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF607Q96SK3 696 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 LRMDAQ9H2I8 198 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 TMEM38AQ9H6F2 299 aa16.5■□□□□ 0.23
SMPDL3A-202ENST00000487215 IQCMA0A1B0GVH7 501 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 M0R3H8 397 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 SPRY3O43610 288 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 CHP2O43745 196 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 CH25HO95992 272 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 IGHV1-46P01743 117 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 PLP2Q04941 152 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 TUSC1Q2TAM9 212 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 NRN1LQ496H8 165 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 PDLIM3Q53GG5 364 aaPredicted RBP16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 TMEM255AQ5JRV8 349 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 FAM209AQ5JX71 171 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF613Q6PF04 617 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 ARMC8Q8IUR7 673 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 LRRC58Q96CX6 371 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 MCHR1Q99705 422 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 IKZF5Q9H5V7 419 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 EVA1AQ9H8M9 152 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 VAPAQ9P0L0 249 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 TRIM33Q9UPN9 1127 aa16.49■□□□□ 0.23
SMPDL3A-202ENST00000487215 TRRAPQ9Y4A5 3859 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 ISPDA4D126 451 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 FMO6PO60774 539 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 SERPINB7O75635 380 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 UBOX5O94941 541 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 TGDSO95455 350 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 MMP7P09237 267 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 PPIBP23284 216 aaKnown RBP16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 SLC6A2P23975 617 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 APLNRP35414 380 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 RBMS3Q6XE24 437 aaKnown RBP16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 LRRC17Q8N6Y2 441 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 SMYD1Q8NB12 490 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 MCHR2Q969V1 340 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 TLCD1Q96CP7 247 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 DUX5Q96PT3 197 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 ARHGDIGQ99819 225 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 TMBIM4Q9HC24 238 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 SLCO1B3Q9NPD5 702 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 NANSQ9NR45 359 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 UBAP1Q9NZ09 502 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 LEF1Q9UJU2 399 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 GMEB1Q9Y692 573 aa16.48■□□□□ 0.23
SMPDL3A-202ENST00000487215 TRBV5-3A0A0A0MS03 114 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 LYPD3O95274 346 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 IGHG1P01857 330 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 THY1P04216 161 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 PRTN3P24158 256 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZFP36P26651 326 aaKnown RBP16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 MRPL19P49406 292 aaKnown RBP16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 MMP15P51511 669 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 NPTX1Q15818 432 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 HIST3H3Q16695 136 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 PAGE3Q5JUK9 113 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 SPATA46Q5T0L3 261 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 EPGNQ6UW88 154 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 DOK3Q7L591 496 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 FUNDC1Q8IVP5 155 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF101Q8IZC7 436 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 LRRC18Q8N456 261 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 CPEB3Q8NE35 698 aaKnown RBP16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 HIPK4Q8NE63 616 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 DEFB108BQ8NET1 73 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 IPCEF1Q8WWN9 437 aaPredicted RBP16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF347Q96SE7 839 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 ZNF229Q9UJW7 825 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 USH1CQ9Y6N9 552 aa16.47■□□□□ 0.23
SMPDL3A-202ENST00000487215 PPIAL4EA0A075B759 164 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 PPIAL4CA0A0B4J2A2 164 aa16.46■□□□□ 0.23
SMPDL3A-202ENST00000487215 DNAJC9-AS1A6NH13 148 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms