RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 EQTNQ9NQ60 294 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CBLN4Q9NTU7 201 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 C1orf109Q9NX04 203 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KLHL9Q9P2J3 617 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 DCDC2Q9UHG0 476 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 KCNS2Q9ULS6 477 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 PYCARDQ9ULZ3 195 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 MGAT4BQ9UQ53 548 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 CCL27Q9Y4X3 112 aa3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 POLR3HQ9Y535 204 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-205ENST00000486941 IGKV3D-15A0A087WSY6 115 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 A0A1B0GU03 582 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 OR5H1A6NKK0 313 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 E7EQL1 145 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 NPIPB9F8W1W9 429 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 G3V2L1 256 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 H7C417 338 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 SLC28A1O00337 649 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ABCD4O14678 606 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 EIF4E2O60573 245 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CYTIPO60759 359 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CRCPO75575 148 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 LYZL6O75951 148 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 NUDT14O95848 222 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 HMGN2P05204 90 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ABHD2P08910 425 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CSF3P09919 207 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 DHRS4L1P0CG22 281 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 MYL2P10916 166 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 DDX5P17844 614 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 GGT1P19440 569 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 COX5AP20674 150 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ATP6V1C1P21283 382 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 USF1P22415 310 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 IGHV1-2P23083 117 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PTAFRP25105 342 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 GCAP28676 217 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ASMTP46597 345 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CENPAP49450 140 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 EFNA4P52798 201 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ATP12AP54707 1039 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CASP9P55211 416 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CDH11P55287 796 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 DNAJB13P59910 316 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 IRX1P78414 480 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CHRNB3Q05901 458 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 RASGEF1BQ0VAM2 473 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 FOXF1Q12946 379 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PDE7AQ13946 482 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PDK3Q15120 406 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 TOMM34Q15785 309 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 STK11Q15831 433 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CFAP157Q5JU67 520 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CCNJQ5T5M9 372 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 FBXW9Q5XUX1 488 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 OR7E24Q6IFN5 339 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ANKRD26P1Q6NSI1 321 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF544Q6NX49 715 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CDC73Q6P1J9 531 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 KLHL17Q6TDP4 642 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CBLN3Q6UW01 205 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZYG11AQ6WRX3 759 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 SYT10Q6XYQ8 523 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 TRMT10CQ7L0Y3 403 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 R3HCC1LQ7Z5L2 792 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 GALNT5Q7Z7M9 940 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF100Q8IYN0 542 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF619Q8N2I2 560 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 MUC15Q8N387 334 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 NATD1Q8N6N6 113 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF433Q8N7K0 673 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 COX18Q8N8Q8 333 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF527Q8NB42 609 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ATP6V1C2Q8NEY4 427 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 OR5W2Q8NH69 310 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PSMA8Q8TAA3 256 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 C10orf105Q8TEF2 133 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZFP90Q8TF47 636 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 IFT81Q8WYA0 676 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZNF75CPQ92670 426 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PROX1Q92786 737 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CDS1Q92903 461 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CIDECQ96AQ7 238 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 PPCDCQ96CD2 204 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 FAM120BQ96EK7 910 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 C16orf58Q96GQ5 468 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 FCRL1Q96LA6 429 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 MUS81Q96NY9 551 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CACNG6Q9BXT2 260 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 SHARPINQ9H0F6 387 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 ZCCHC3Q9NUD5 404 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 NPAP1Q9NZP6 1156 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 NDUFAF4Q9P032 175 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 BAG5Q9UL15 447 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CARD8Q9Y2G2 431 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 TMED5Q9Y3A6 229 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 WNK2Q9Y3S1 2297 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 CUBNO60494 3623 aa3.43□□□□□ -1.86
SNRNP40-205ENST00000486941 IGHV3-15A0A0B4J1V0 119 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms