RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 AKR7A2O43488 359 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 OR2T1O43869 369 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 MAS1P04201 325 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 ANXA3P12429 323 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 CDK2P24941 298 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC26A5P58743 744 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 COL28A1Q2UY09 1125 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 KANSL1Q7Z3B3 1105 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 OR51A4Q8NGJ6 313 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 C15orf40Q8WUR7 153 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 MCHR2Q969V1 340 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 COL25A1Q9BXS0 654 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 SEMA4CQ9C0C4 833 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 OR11A1Q9GZK7 315 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 ELOVL3Q9HB03 270 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 MRPL22Q9NWU5 206 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF222Q9UK12 451 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 HSPB11Q9Y547 144 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 CPAMD8Q8IZJ3 1885 aa16.2■□□□□ 0.18
PDLIM7-207ENST00000486828 SEC16AO15027 2179 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ARPC4-TTLL3A0A0A6YYG9 625 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC22A23A1A5C7 686 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 GMDSO60547 372 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 TPPPO94811 219 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 LDOC1O95751 146 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 FOXL2P58012 376 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 RPS15P62841 145 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ELFN2Q5R3F8 820 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC18B1Q6NT16 456 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 CREB3L2Q70SY1 520 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC35D2Q76EJ3 337 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 FGD2Q7Z6J4 655 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF227Q86WZ6 799 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF679Q8IYX0 411 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 C9orf62Q8N4C0 152 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 TMEM234Q8WY98 164 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 CLDN23Q96B33 292 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 FOXN4Q96NZ1 517 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF587Q96SQ5 575 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ULBP3Q9BZM4 244 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC7A5P2Q9GIP4 190 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 EMC3Q9P0I2 261 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 STEAP1Q9UHE8 339 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SIT1Q9Y3P8 196 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 IGLV3-12A0A075B6K2 115 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ANKRD20A5PA0PJZ0 165 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 FTCDNL1E5RQL4 147 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 TOX3O15405 576 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 KHDRBS3O75525 346 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 CTLA4P16410 223 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 CSRP1P21291 193 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 TAS2R20P59543 309 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SNRPD2P62316 118 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ROM1Q03395 351 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ANGPT1Q15389 498 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SHBQ15464 509 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ODF4Q2M2E3 257 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 TEX30Q5JUR7 227 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 OTPQ5XKR4 325 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 SFRP4Q6FHJ7 346 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 RABEPKQ7Z6M1 372 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 APCDD1LQ8NCL9 501 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 OR6S1Q8NH40 331 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 RNF128Q8TEB7 428 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 RANBP3Q9H6Z4 567 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 KLK11Q9UBX7 282 aa16.19■□□□□ 0.18
PDLIM7-207ENST00000486828 ASXL3Q9C0F0 2248 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 RP1P56715 2156 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 ANKRD34BA5PLL1 514 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 ANKUB1A6NFN9 424 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 ACOT7O00154 380 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 PEX14O75381 377 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 PDGFBP01127 241 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 SPARCP09486 303 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 CXCL3P19876 107 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 CFPP27918 469 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 GALK2Q01415 458 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 TMEM255AQ5JRV8 349 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 OLFML2AQ68BL7 652 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 TMEM71Q6P5X7 295 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 ANKRD37Q7Z713 158 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 OR11G2Q8NGC1 345 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 TSEN15Q8WW01 171 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 C8orf44Q96CB5 159 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 ZFP64Q9NPA5 681 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 UNC13CQ8NB66 2214 aa16.18■□□□□ 0.18
PDLIM7-207ENST00000486828 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 SULT1A3P0DMM9 295 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 SULT1A4P0DMN0 295 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 PSMB1P20618 241 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 ADAM8P78325 824 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 MELKQ14680 651 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 ETFDHQ16134 617 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 KCTD18Q6PI47 426 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 C16orf47Q6ZP98 133 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 TMPRSS9Q7Z410 1059 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms