RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZNF350Q9GZX5 532 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 XKR8Q9H6D3 395 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 MRM2Q9UI43 246 aaKnown RBP9.67□□□□□ -0.86
CCDC171-208ENST00000486641 KLHDC2Q9Y2U9 406 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
CCDC171-208ENST00000486641 EML5Q05BV3 1969 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 SCN3AQ9NY46 2000 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TEX13DA0A0J9YY54 714 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM72A0PK05 275 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NDUFB2O95178 105 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 LY86O95711 162 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 EFEMP2O95967 443 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RNF224P0DH78 156 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF28P17035 718 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RBM34P42696 430 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 CAP1Q01518 475 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NAAAQ02083 359 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 PRDX1Q06830 199 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 LYG2Q86SG7 212 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 AMZ2Q86W34 360 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 OR4N5Q8IXE1 308 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 OR2L5Q8NG80 312 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 OR4E2Q8NGC2 313 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 DCUN1D4Q92564 292 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 FAM3DQ96BQ1 224 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 SGK3Q96BR1 496 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 FOXRED1Q96CU9 486 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NUS1Q96E22 293 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 GAL3ST1Q99999 423 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 MSRAQ9UJ68 235 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 CSAG2Q9Y5P2 127 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 LOC100509620A0A075B734 347 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TRBV5-7A0A0A0MS05 114 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 A0A0B4J2E0 115 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 A0A1B0GWA3 101 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 A0A1B0GX12 115 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 C4orf47A7E2U8 309 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 SPINT1O43278 529 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TGM5O43548 720 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 MT-ND4LP03901 98 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TACSTD2P09758 323 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RPL4P36578 427 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 HSD17B2P37059 387 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NTHL1P78549 312 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 SLC7A9P82251 487 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 GXYLT1Q4G148 440 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 DCST2Q5T1A1 773 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 DRAM2Q6UX65 266 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 KCTD9Q7L273 389 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 OR2A1Q8NGT9 310 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NUDCD2Q8WVJ2 157 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 TRIM43Q96BQ3 446 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RASD2Q96D21 266 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 MRGPRX3Q96LB0 322 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 ADAD1Q96M93 576 aaKnown RBP9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 GGACTQ9BVM4 153 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 CST11Q9H112 138 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 RPS10P5Q9NQ39 176 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 LPAR3Q9UBY5 353 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 INSL5Q9Y5Q6 135 aa9.66□□□□□ -0.86
CCDC171-208ENST00000486641 NUP210LQ5VU65 1888 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 SPTBP11277 2137 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 USP34Q70CQ2 3546 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 A0A0A6YYC8 382 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 C9orf170A2RU37 121 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 I3L1I5 382 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 PPIHO43447 177 aaKnown RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 CDC40O60508 579 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 PSMB6P28072 239 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 ADH6P28332 368 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 PBX2P40425 430 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 PPICP45877 212 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 PGDP52209 483 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 NKPD1Q17RQ9 610 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 TRMT12Q53H54 448 aaKnown RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 SLC35D3Q5M8T2 416 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 LINC01590Q5TEZ4 76 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 TMEM244Q5VVB8 128 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 ZNF627Q7L945 461 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 CD163Q86VB7 1156 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 SLC25A42Q86VD7 318 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 NRROSQ86YC3 692 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 ETFBKMTQ8IXQ9 262 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 SAMD14Q8IZD0 417 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 C3orf49Q96BT1 292 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 LRFN5Q96NI6 719 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 LMF1Q96S06 567 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 MAP3K3Q99759 626 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 MICU1Q9BPX6 476 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 IER2Q9BTL4 223 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 NMNAT2Q9BZQ4 307 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 ZMAT3Q9HA38 289 aaKnown RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 RXFP3Q9NSD7 469 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms