RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 OR8G3PP0DMU2 310 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 RAP2AP10114 183 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 CD79AP11912 226 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 B4GALT1P15291 398 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 ARR3P36575 388 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF133P52736 654 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 CDH11P55287 796 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 ERVK-25P63136 954 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 MYBPC1Q00872 1141 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 CD47Q08722 323 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 TESK1Q15569 626 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 C11orf91Q3C1V1 193 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 THEM4Q5T1C6 240 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 OR2T5Q6IEZ7 315 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 ZER1Q7Z7L7 766 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 SLC22A24Q8N4F4 322 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 LINC00471Q8N535 108 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 IL17RDQ8NFM7 739 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 OR2T29Q8NH02 315 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 GNPDA2Q8TDQ7 276 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 DNAJC9Q8WXX5 260 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 HDAC2Q92769 488 aaKnown RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 KATNB1Q9BVA0 655 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 DENND2DQ9H6A0 471 aaPredicted RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 SMURF2Q9HAU4 748 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 ATP23Q9Y6H3 246 aa10.85□□□□□ -0.67
HMG20B-211ENST00000486028 HEATR1Q9H583 2144 aaKnown RBP10.85□□□□□ -0.67
HMG20B-211ENST00000486028 DSCAMO60469 2012 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 DHRS12A0PJE2 317 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 XKRYO14609 159 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 ARHGEF9O43307 516 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 SMPD2O60906 423 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 CCNB2O95067 398 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 UBL3O95164 117 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 CRYAAP02489 173 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF26P17031 533 aaPredicted RBP10.84□□□□□ -0.67
HMG20B-211ENST00000486028 FPR3P25089 353 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 VHLP40337 213 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 PIGFQ07326 219 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 FLOT2Q14254 428 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 GSG1Q2KHT4 349 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 GPR139Q6DWJ6 353 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 DPPA2Q7Z7J5 298 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 MDP1Q86V88 176 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 SPATA24Q86W54 205 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 ADGRG5Q8IZF4 528 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 ZNF519Q8TB69 540 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 TMEM171Q8WVE6 324 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 NMD3Q96D46 503 aaKnown RBP10.84□□□□□ -0.67
HMG20B-211ENST00000486028 TSPAN32Q96QS1 320 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 GPA33Q99795 319 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 CHID1Q9BWS9 393 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 CADM1Q9BY67 442 aaKnown RBP10.84□□□□□ -0.67
HMG20B-211ENST00000486028 CXXC4Q9H2H0 198 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 REEP1Q9H902 201 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 FAIMQ9NVQ4 179 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 MOKQ9UQ07 419 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 POMPQ9Y244 141 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 LYVE1Q9Y5Y7 322 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 PLCE1Q9P212 2302 aa10.84□□□□□ -0.67
HMG20B-211ENST00000486028 AKAP9Q99996 3911 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 ARID1AO14497 2285 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 PRRC2AP48634 2157 aaKnown RBP10.83□□□□□ -0.68
HMG20B-211ENST00000486028 E7EQL1 145 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 IGKV3-15P01624 115 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 CECR9P0C854 216 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 NPR2P20594 1047 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 GUCA1AP43080 201 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-211ENST00000486028 GSSP48637 474 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 PTDSS1P48651 473 aaKnown RBP10.83□□□□□ -0.68
HMG20B-211ENST00000486028 IDH3GP51553 393 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-211ENST00000486028 RPS6KA3P51812 740 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 RAB1AP62820 205 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 NAAAQ02083 359 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 SPOCK1Q08629 439 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 NPRL3Q12980 569 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 TSPAN31Q12999 210 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 RFX4Q33E94 735 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 C10orf128Q5T292 105 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 PGBD2Q6P3X8 592 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 SLC25A47Q6Q0C1 308 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 SPNS3Q6ZMD2 512 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 SKA3Q8IX90 412 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 OR4C15Q8NGM1 316 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 NSMAFQ92636 917 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 Q96M85 177 aa10.83□□□□□ -0.68
HMG20B-211ENST00000486028 GPX7Q96SL4 187 aaPredicted RBP10.83□□□□□ -0.68
HMG20B-211ENST00000486028 SH3GL3Q99963 347 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms