RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TMEM225Q6GV28 225 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 NIPAL3Q6P499 406 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 PLXDC2Q6UX71 529 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 FCRLAQ7L513 359 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CXXC5Q7LFL8 322 aaKnown RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 CPOQ8IVL8 374 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CISD2Q8N5K1 135 aaKnown RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 NANOGP1Q8N7R0 232 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 CYB561A3Q8NBI2 242 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 BBS1Q8NFJ9 593 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 OR9K2Q8NGE7 335 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 FNDC9Q8TBE3 224 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 ABHD3Q8WU67 409 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 KISS1RQ969F8 398 aaPredicted RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 DACH2Q96NX9 599 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 ZNF385AQ96PM9 386 aaKnown RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 NMNAT3Q96T66 252 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 JAM3Q9BX67 310 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 MMP27Q9H306 513 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 TIGARQ9NQ88 270 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 VSX1Q9NZR4 365 aaPredicted RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 H2AFY2Q9P0M6 372 aaPredicted RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 GRHPRQ9UBQ7 328 aa10.06□□□□□ -0.8
SND1-212ENST00000485871 PHF3Q92576 2039 aaKnown RBP10.06□□□□□ -0.8
SND1-212ENST00000485871 NPIPA2E9PIF3 369 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 NPIPA3F8WFD2 350 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 DCTN6O00399 190 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNF432O94892 652 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 IFNGP01579 166 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 SFTPCP11686 197 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNF12P17014 697 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNF3P17036 446 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNF43P17038 809 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 PSMA1P25786 263 aaKnown RBP10.05□□□□□ -0.8
SND1-212ENST00000485871 SOX6P35712 828 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ACVR1BP36896 505 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 MTNR1AP48039 350 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 DAP3P51398 398 aaKnown RBP10.05□□□□□ -0.8
SND1-212ENST00000485871 SLC25A1P53007 311 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 CDH11P55287 796 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 BIDP55957 195 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 VBP1P61758 197 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 PON3Q15166 354 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 MED22Q15528 200 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 HIST3H3Q16695 136 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 KRTCAP3Q53RY4 240 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 LEG1Q6P5S2 330 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZGRF1Q86YA3 2104 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 PM20D2Q8IYS1 436 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 GHDCQ8N2G8 530 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 TEX19Q8NA77 164 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 OR6X1Q8NH79 312 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNRF4Q8WWF5 429 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 EMC6Q9BV81 110 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 DCSTAMPQ9H295 470 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 MED20Q9H944 212 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 RNF122Q9H9V4 155 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 BCO1Q9HAY6 547 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 CAMK2AQ9UQM7 478 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
SND1-212ENST00000485871 ZNF175Q9Y473 711 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 FLVCR1Q9Y5Y0 555 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 SVILO95425 2214 aa10.05□□□□□ -0.8
SND1-212ENST00000485871 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 SLC22A23A1A5C7 686 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 PRSS37A4D1T9 235 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 SLC35F4A4IF30 521 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 A6NIZ1 184 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 PRR23D1E9PI22 279 aaPredicted RBP10.04□□□□□ -0.8
SND1-212ENST00000485871 H7C1C5 153 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ARHGEF9O43307 516 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 SYNGR4O95473 234 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 TGM6O95932 706 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ADRA2AP08913 450 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 HSMCR30P0CW71 290 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 PGA4P0DJD7 388 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 PGA3P0DJD8 388 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 PRR23D2P0DMB1 279 aaPredicted RBP10.04□□□□□ -0.8
SND1-212ENST00000485871 GADD45AP24522 165 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 HTR1FP30939 366 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ENTPD1P49961 510 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ZNF133P52736 654 aaPredicted RBP10.04□□□□□ -0.8
SND1-212ENST00000485871 WNT4P56705 351 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 RAP1BP61224 184 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 LCN6P62502 163 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 RAP1AP62834 184 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 RASGEF1BQ0VAM2 473 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 GUSBP1Q15486 140 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 GPAT4Q86UL3 456 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ZBTB46Q86UZ6 589 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 TMEM123Q8N131 208 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 OR52I1Q8NGK6 324 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 TMEM45BQ96B21 275 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 RNFT2Q96EX2 444 aa10.04□□□□□ -0.8
SND1-212ENST00000485871 ADAD1Q96M93 576 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms