RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 OR2T4Q8NH00 348 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 LRTOMTQ8WZ04 291 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 MCHR2Q969V1 340 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 C14orf79Q96F83 325 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 ALKBH3Q96Q83 286 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-208ENST00000485618 SNX18Q96RF0 628 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 FOXB1Q99853 325 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 C9orf16Q9BUW7 83 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 TSSK6Q9BXA6 273 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 VCXQ9H320 206 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 SIAEQ9HAT2 523 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 SLC17A5Q9NRA2 495 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 KRT84Q9NSB2 600 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
SF3A1-208ENST00000485618 F8P00451 2351 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 FREM1Q5H8C1 2179 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ARPC4-TTLL3A0A0A6YYG9 625 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 TEX13CA0A0J9YWL9 993 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SLC22A23A1A5C7 686 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 A6NNC1 897 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 C12orf71A8MTZ7 269 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SOCS2O14508 198 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 TMCC2O75069 709 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 PPP1R3DO95685 299 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 RAB36O95755 333 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ITGA5P08648 1049 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 FUT4P22083 530 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 PRKACGP22612 351 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 CRYGSP22914 178 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 IGFBP5P24593 272 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 PTAFRP25105 342 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GRK5P34947 590 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GIPRP48546 466 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 IST1P53990 364 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GLO1Q04760 184 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 PLP2Q04941 152 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 LGALS3BPQ08380 585 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 FHL1Q13642 323 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 KRTAP21-3Q3LHN1 58 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 C3orf36Q3SXR2 165 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 TBRG1Q3YBR2 411 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SLC36A3Q495N2 470 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 CLEC12AQ5QGZ9 265 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 C10orf128Q5T292 105 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 C9orf135Q5VTT2 229 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ALKBH2Q6NS38 261 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 FAHD1Q6P587 224 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 LRFN4Q6PJG9 635 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ZBTB49Q6ZSB9 765 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF627Q7L945 461 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 FAM122BQ7Z309 247 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GLB1L2Q8IW92 636 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 PQLC1Q8N2U9 271 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 LNX2Q8N448 690 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 LRRC75AQ8NAA5 344 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ACBD4Q8NC06 268 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 OR52N5Q8NH56 324 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF519Q8TB69 540 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 BCL2L2Q92843 193 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-208ENST00000485618 EME1Q96AY2 570 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 ZC3HAV1LQ96H79 300 aaKnown RBP7.26□□□□□ -1.25
SF3A1-208ENST00000485618 Q96M85 177 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 TSPAN32Q96QS1 320 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 KCNK17Q96T54 332 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GPA33Q99795 319 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 GABARAPL1Q9H0R8 117 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SEMA6AQ9H2E6 1030 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 C1orf198Q9H425 327 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SEC61A2Q9H9S3 476 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 NTN4Q9HB63 628 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 CCNB1IP1Q9NPC3 277 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 VNN3Q9NY84 501 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 SPEF1Q9Y4P9 236 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 TACC2O95359 2948 aa7.26□□□□□ -1.25
SF3A1-208ENST00000485618 HCFC1P51610 2035 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 A0A096LPE4 126 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 SLC16A7O60669 478 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 HLA-DQA2P01906 255 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 CD3EP07766 207 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 CD79AP11912 226 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF823P16415 610 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 PTDSS1P48651 473 aaKnown RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF133P52736 654 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 CRISP1P54107 249 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 KRTAP10-9P60411 292 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 MRPS34P82930 218 aaKnown RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 TLE4Q04727 773 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 GINS1Q14691 196 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 TAB1Q15750 504 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 SGCAQ16586 387 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 GSG1Q2KHT4 349 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 LEG1Q6P5S2 330 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 ARL9Q6T311 187 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 SLC16A14Q7RTX9 510 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms