RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KRT72Q14CN4 511 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 SLC36A2Q495M3 483 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 FAM205BPQ63HN1 556 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 C16orf89Q6UX73 402 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 SLC16A14Q7RTX9 510 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 RBM15BQ8NDT2 890 aaKnown RBP12.02□□□□□ -0.49
VARS-225ENST00000482996 OR4K5Q8NGD3 323 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 OR51A7Q8NH64 312 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 FNDC8Q8TC99 324 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 HTRA1Q92743 480 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 SH3GL3Q99963 347 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 ALG12Q9BV10 488 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 GORASP2Q9H8Y8 452 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 RNF121Q9H920 327 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 SMURF2Q9HAU4 748 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 ARL8BQ9NVJ2 186 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 ZNF224Q9NZL3 707 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 CMAHPQ9Y471 501 aa12.02□□□□□ -0.49
VARS-225ENST00000482996 TRAV27A0A087WT01 109 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 A0A1W2PRQ8 180 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 A6NIZ1 184 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 hCG_2039718K7EN88 272 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 ATP5HO75947 161 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 IGHMP01871 453 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 SERPINA5P05154 406 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 PATE4P0C8F1 98 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 ITGA2P17301 1181 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 FUT4P22083 530 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 NR4A1P22736 598 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 GPR4P46093 362 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 ZNF133P52736 654 aaPredicted RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 RAP1BP61224 184 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 RPL27P61353 136 aaKnown RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 RAP1AP62834 184 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 DGCR6Q14129 220 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 RAB39AQ14964 217 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 FGD3Q5JSP0 725 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 C10orf128Q5T292 105 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 KRT80Q6KB66 452 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 TBPL2Q6SJ96 375 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 TMPRSS11FQ6ZWK6 438 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 MEX3DQ86XN8 651 aaKnown RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 FAM156AQ8NDB6 213 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 OR13C2Q8NGS9 318 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 FAM168AQ92567 244 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 HDAC2Q92769 488 aaKnown RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 NSMCE2Q96MF7 247 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 ZNF75AQ96N20 296 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 RBP7Q96R05 134 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 TNFRSF13CQ96RJ3 184 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 CDRT15Q96T59 188 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 C1orf198Q9H425 327 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 KRCC1Q9NPI7 259 aaPredicted RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 NDUFAF4Q9P032 175 aa12.01□□□□□ -0.49
VARS-225ENST00000482996 ZNF346Q9UL40 294 aaKnown RBP12.01□□□□□ -0.49
VARS-225ENST00000482996 ABCA1O95477 2261 aa12□□□□□ -0.49
VARS-225ENST00000482996 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
VARS-225ENST00000482996 UBOX5O94941 541 aa12□□□□□ -0.49
VARS-225ENST00000482996 PTHP01270 115 aa12□□□□□ -0.49
VARS-225ENST00000482996 TP53P04637 393 aaPredicted RBP12□□□□□ -0.49
VARS-225ENST00000482996 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
VARS-225ENST00000482996 ZNF35P13682 527 aa12□□□□□ -0.49
VARS-225ENST00000482996 SLC25A16P16260 332 aa12□□□□□ -0.49
VARS-225ENST00000482996 RPL4P36578 427 aaKnown RBP12□□□□□ -0.49
VARS-225ENST00000482996 GUCA1AP43080 201 aaPredicted RBP12□□□□□ -0.49
VARS-225ENST00000482996 PPOXP50336 477 aa12□□□□□ -0.49
VARS-225ENST00000482996 SMIM11AP58511 58 aa12□□□□□ -0.49
VARS-225ENST00000482996 MRPS34P82930 218 aaKnown RBP12□□□□□ -0.49
VARS-225ENST00000482996 PLP2Q04941 152 aa12□□□□□ -0.49
VARS-225ENST00000482996 FXNQ16595 210 aa12□□□□□ -0.49
VARS-225ENST00000482996 SPATS1Q496A3 300 aa12□□□□□ -0.49
VARS-225ENST00000482996 ZBED5Q49AG3 693 aa12□□□□□ -0.49
VARS-225ENST00000482996 THEM4Q5T1C6 240 aa12□□□□□ -0.49
VARS-225ENST00000482996 PODNL1Q6PEZ8 512 aa12□□□□□ -0.49
VARS-225ENST00000482996 TSEN54Q7Z6J9 526 aaKnown RBP12□□□□□ -0.49
VARS-225ENST00000482996 IGFN1Q86VF2 1251 aa12□□□□□ -0.49
VARS-225ENST00000482996 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
VARS-225ENST00000482996 ZNF525Q8N782 197 aa12□□□□□ -0.49
VARS-225ENST00000482996 MAPK1IP1LQ8NDC0 245 aa12□□□□□ -0.49
VARS-225ENST00000482996 OR10H5Q8NGA6 315 aa12□□□□□ -0.49
VARS-225ENST00000482996 FGFBP3Q8TAT2 258 aa12□□□□□ -0.49
VARS-225ENST00000482996 SLC7A13Q8TCU3 470 aa12□□□□□ -0.49
VARS-225ENST00000482996 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
VARS-225ENST00000482996 POM121Q96HA1 1249 aa12□□□□□ -0.49
VARS-225ENST00000482996 PYURFQ96I23 114 aa12□□□□□ -0.49
VARS-225ENST00000482996 C7orf34Q96L11 122 aa12□□□□□ -0.49
VARS-225ENST00000482996 SORCS2Q96PQ0 1159 aa12□□□□□ -0.49
VARS-225ENST00000482996 KCNK17Q96T54 332 aa12□□□□□ -0.49
VARS-225ENST00000482996 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
VARS-225ENST00000482996 SIAEQ9HAT2 523 aa12□□□□□ -0.49
VARS-225ENST00000482996 CD300AQ9UGN4 299 aa12□□□□□ -0.49
VARS-225ENST00000482996 V9GYQ6 96 aa12□□□□□ -0.49
VARS-225ENST00000482996 JMJD1CQ15652 2540 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms