RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CDCA4Q9BXL8 241 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ALX4Q9H161 411 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 SDCBP2Q9H190 292 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ARRDC1-AS1Q9H2J1 176 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 CPVLQ9H3G5 476 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ZSCAN16Q9H4T2 348 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 TMEM27Q9HBJ8 222 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 EML4Q9HC35 981 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 IL1RAPQ9NPH3 570 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 ABCC13Q9NSE7 274 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 TEX10Q9NXF1 929 aaPredicted RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 GHRLQ9UBU3 117 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 LSM7Q9UK45 103 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 FBXL2Q9UKC9 423 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 AGO1Q9UL18 857 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 AK6Q9Y3D8 172 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 FAM32AQ9Y421 112 aaKnown RBP3.55□□□□□ -1.84
VPS41-212ENST00000482217 MTCH2Q9Y6C9 303 aa3.55□□□□□ -1.84
VPS41-212ENST00000482217 SMCHD1A6NHR9 2005 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 FGD5Q6ZNL6 1462 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 KIAA0232Q92628 1395 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 NRCAMQ92823 1304 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 A0A0A6YYD5 115 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 A0A1B0GV90 55 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 A0A1B0GVT2 93 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 PLPP1O14494 284 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TIMM23O14925 209 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ARPC2O15144 300 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TCAPO15273 167 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 XPNPEP2O43895 674 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 FADS1O60427 444 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CTSVO60911 334 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SMIM24O75264 130 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 AP2A1O95782 977 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ANGPTL1O95841 491 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 HPP00738 406 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CALB1P05937 261 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CTSLP07711 333 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 RHOCP08134 193 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 HCKP08631 526 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 THRAP10827 490 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CDH1P12830 882 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ADRB3P13945 408 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CD36P16671 472 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 FUT3P21217 361 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 WARSP23381 471 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 SFTPDP35247 375 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SLCO1A2P46721 670 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 DNA2P51530 1060 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 AP1S2P56377 157 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR4D2P58180 307 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ERVPABLB-1P60509 514 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OSTNP61366 133 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 AP1S1P61966 158 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 PRKCDQ05655 676 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 MFGE8Q08431 387 aaPredicted RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 Q0VFX4 171 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TAF10Q12962 218 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TRAF3Q13114 568 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 KRR1Q13601 381 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 SF3A2Q15428 464 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 TOMM34Q15785 309 aaPredicted RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 TAL2Q16559 108 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ATP6V1FQ16864 119 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TRMT5Q32P41 509 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 AKIRIN2Q53H80 203 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 RBM48Q5RL73 367 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 DDI2Q5TDH0 399 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 FRG2Q64ET8 278 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SLC27A4Q6P1M0 643 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 LEG1Q6P5S2 330 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 GCNT7Q6ZNI0 430 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 C3orf62Q6ZUJ4 267 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 C9orf139Q6ZV77 190 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ISCA2Q86U28 154 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 APOBEC3FQ8IUX4 373 aaKnown RBP3.54□□□□□ -1.84
VPS41-212ENST00000482217 ZNF547Q8IVP9 402 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SLC35F2Q8IXU6 374 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 BLIDQ8IZY5 108 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ABHD12Q8N2K0 398 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CENPSQ8N2Z9 138 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 CCDC54Q8NEL0 328 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR4F17Q8NGA8 305 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR4D9Q8NGE8 314 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR10W1Q8NGF6 305 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR10X1Q8NGY0 326 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR4F5Q8NH21 305 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 GPR151Q8TDV0 419 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 IFT81Q8WYA0 676 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ART4Q93070 314 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 UBE2E3Q969T4 207 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 MARC2Q969Z3 335 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 MS4A14Q96JA4 679 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 SERPINB12Q96P63 405 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OLFM3Q96PB7 478 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 ZIM3Q96PE6 472 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 NEDD4LQ96PU5 975 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 OR4F4Q96R69 305 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 RNF2Q99496 336 aa3.54□□□□□ -1.84
VPS41-212ENST00000482217 TIPINQ9BVW5 301 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms