RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TEX29Q8N6K0 151 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 CPEB3Q8NE35 698 aaKnown RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 OR6T1Q8NGN1 323 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 OR6X1Q8NH79 312 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 SGMS2Q8NHU3 365 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 SYNPRQ8TBG9 265 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ZFAND2BQ8WV99 257 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 RDH5Q92781 318 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 HPS1Q92902 700 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 FAHD2AQ96GK7 314 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM120AQ9BXJ8 343 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MRPL37Q9BZE1 423 aaKnown RBP6.1□□□□□ -1.43
COL17A1-205ENST00000480127 SLC19A3Q9BZV2 496 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 EGLN1Q9GZT9 426 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 IKZF5Q9H5V7 419 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 RERGLQ9H628 205 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 TAAR3PQ9P1P4 343 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 METRNQ9UJH8 293 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF229Q9UJW7 825 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 PCDHB10Q9UN67 800 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 MED31Q9Y3C7 131 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 CHST2Q9Y4C5 530 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 ARFGEF3Q5TH69 2177 aa6.1□□□□□ -1.43
COL17A1-205ENST00000480127 LOC100653049A0A140TA62 436 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM89A2RUT3 159 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 C5orf49A4QMS7 147 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 BBIP1A8MTZ0 92 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 XKRYO14609 159 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 RGS9O75916 674 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 KRT34O76011 436 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 OR7A10O76100 309 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF682O95780 498 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 SERPINA5P05154 406 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 FUT1P19526 365 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ACHEP22303 614 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TNFSF4P23510 183 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 GIFP27352 417 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 MRPL19P49406 292 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 CENPAP49450 140 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 EVX1P49640 407 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ARHGDIAP52565 204 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 CCL8P80075 99 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 MVKQ03426 396 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 RPL18Q07020 188 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 VMACQ2NL98 169 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 HFEQ30201 348 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 PCGF3Q3KNV8 242 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ZMAT1Q5H9K5 638 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 PHYHD1Q5SRE7 291 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 SPATA46Q5T0L3 261 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 DLEU7Q6UYE1 221 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 THSD4Q6ZMP0 1018 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 COMTD1Q86VU5 262 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 RBM45Q8IUH3 476 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 SKA3Q8IX90 412 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 C10orf111Q8N326 155 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 LRRC17Q8N6Y2 441 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 OR51F2Q8NH61 342 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ZNF418Q8TF45 676 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM239Q8WW34 195 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 RAB39BQ96DA2 213 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ZMYND19Q96E35 227 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 RBP7Q96R05 134 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 DOK1Q99704 481 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 ARHGDIGQ99819 225 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 GAL3ST1Q99999 423 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 FNDC11Q9BVV2 318 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 BCL2L14Q9BZR8 327 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 NELFAQ9H3P2 528 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 METTL17Q9H7H0 456 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 KAT8Q9H7Z6 458 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 NANOGQ9H9S0 305 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 SAP30LQ9HAJ7 183 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 HINT3Q9NQE9 182 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TMEM38BQ9NVV0 291 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 UBAP1Q9NZ09 502 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 TREM2Q9NZC2 230 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 FAM32AQ9Y421 112 aaKnown RBP6.09□□□□□ -1.43
COL17A1-205ENST00000480127 CAPN7Q9Y6W3 813 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 DYSFO75923 2080 aa6.09□□□□□ -1.43
COL17A1-205ENST00000480127 IGHV1-69-2A0A0G2JMI3 117 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 CLDN25C9JDP6 229 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 SPRY3O43610 288 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TIMM8AO60220 97 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 EDF1O60869 148 aaKnown RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 FZD7O75084 574 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 OR5F1O95221 314 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TFP02787 698 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 MT-ND1P03886 318 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 IFNW1P05000 195 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 IGFBP1P08833 259 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 IFI30P13284 250 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ACADSP16219 412 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 ZNF14P17017 642 aaPredicted RBP6.08□□□□□ -1.44
COL17A1-205ENST00000480127 TNFRSF1BP20333 461 aa6.08□□□□□ -1.44
COL17A1-205ENST00000480127 AQP2P41181 271 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms