RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZNF300Q96RE9 604 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SNX18Q96RF0 628 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 KCTD14Q9BQ13 255 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 FUZQ9BT04 418 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ALG12Q9BV10 488 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 TRIM15Q9C019 465 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 NDEL1Q9GZM8 345 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CXorf56Q9H5V9 222 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MAGIXQ9H6Y5 334 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF442Q9H7R0 627 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 IL1RAPQ9NPH3 570 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 KRCC1Q9NPI7 259 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MEPEQ9NQ76 525 aaPredicted RBP4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SLC17A5Q9NRA2 495 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SLC7A10Q9NS82 523 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 FAIMQ9NVQ4 179 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ARMCX1Q9P291 453 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ATPIF1Q9UII2 106 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 RIMS3Q9UJD0 308 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ADAM21Q9UKJ8 722 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SH3GLB1Q9Y371 365 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 MED31Q9Y3C7 131 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 RNF115Q9Y4L5 304 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CREBBPQ92793 2442 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 SPG11Q96JI7 2443 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 ZGRF1Q86YA3 2104 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 PKDREJQ9NTG1 2253 aa4.28□□□□□ -1.72
PTCD3-213ENST00000480102 CROCCQ5TZA2 2017 aa4.28□□□□□ -1.73
PTCD3-213ENST00000480102 DNAJC13O75165 2243 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 A6NIZ1 184 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 AQP12BA6NM10 295 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 CYSRT1A8MQ03 144 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 H3BSA7 217 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 H7C417 338 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 M0R3H8 397 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 IMPA2O14732 288 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ARPC3O15145 178 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 IDH3BO43837 385 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 GMFGO60234 142 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 RAMP1O60894 148 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ATP5HO75947 161 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 AKR7A3O95154 331 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 SNAP29O95721 258 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TXNDC12O95881 172 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 IGHG1P01857 330 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 UMPSP11172 480 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 CBR1P16152 277 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TNFRSF1AP19438 455 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 AQP1P29972 269 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 IFNGR2P38484 337 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 RPS5P46782 204 aaKnown RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 RAP1BP61224 184 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 RAP1AP62834 184 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 LTBQ06643 244 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TRAP1Q12931 704 aaKnown RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 PMS2P3Q13401 168 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 C1DQ13901 141 aaKnown RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TRIM25Q14258 630 aaKnown RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TRAM2Q15035 370 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 EFNB3Q15768 340 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 DNAL1Q4LDG9 190 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 THEM4Q5T1C6 240 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 GPR139Q6DWJ6 353 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 GLYATQ6IB77 296 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 RPL13AP3Q6NVV1 102 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 CASP12Q6UXS9 341 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 WDR88Q6ZMY6 472 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ZNF704Q6ZNC4 412 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 DNM1P46Q6ZS02 220 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ADCK1Q86TW2 530 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 TMEM200AQ86VY9 491 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 AQP12AQ8IXF9 295 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 BCL6BQ8N143 479 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 WDR31Q8NA23 367 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 OR4F15Q8NGB8 312 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 OR4D11Q8NGI4 311 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 OR1K1Q8NGR3 316 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 SLC7A13Q8TCU3 470 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 CFHR4Q92496 578 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 BCL2L2Q92843 193 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ITFG2Q969R8 447 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ZBTB9Q96C00 473 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 ASB9Q96DX5 294 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 THOC1Q96FV9 657 aaKnown RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 PYURFQ96I23 114 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 NSL1Q96IY1 281 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 NSMCE2Q96MF7 247 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 WFDC6Q9BQY6 131 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 OR10A2Q9H208 303 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 MS4A5Q9H3V2 200 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 NMNAT1Q9HAN9 279 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 MSL2Q9HCI7 577 aa4.27□□□□□ -1.73
PTCD3-213ENST00000480102 MYOZ1Q9NP98 299 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-213ENST00000480102 MAN2C1Q9NTJ4 1040 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms