RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 PAN3Q58A45 887 aaKnown RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 OLFML2AQ68BL7 652 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 CLEC6AQ6EIG7 209 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 TMPRSS11AQ6ZMR5 421 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 LHFPL3Q86UP9 236 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 C17orf78Q8N4C9 275 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 OR2A12Q8NGT7 310 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 ART5Q96L15 291 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 NOL4LQ96MY1 436 aaPredicted RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 TSSK3Q96PN8 268 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 MCCC1Q96RQ3 725 aaPredicted RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 SELENOIQ9C0D9 397 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 ZSCAN16Q9H4T2 348 aaPredicted RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 LY9Q9HBG7 655 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 ZNF275Q9NSD4 429 aaPredicted RBP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 NRBP2Q9NSY0 501 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 MUTYHQ9UIF7 546 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 WDR97A6NE52 1622 aa4.93□□□□□ -1.62
PBRM1-220ENST00000480064 AQRO60306 1485 aaKnown RBP eCLIP4.93□□□□□ -1.62
PBRM1-220ENST00000480064 ANKRD30AQ9BXX3 1397 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 RB1CC1Q8TDY2 1594 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 A0A1B0GW55 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 TSPAN11A1L157 253 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 SLC22A20A6NK97 555 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 A8MX80 341 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 LIN7AO14910 233 aaPredicted RBP4.92□□□□□ -1.62
PBRM1-220ENST00000480064 MPDU1O75352 247 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 CLDN11O75508 207 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L2P0CJ85 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L3P0CJ86 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L4P0CJ87 422 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L5P0CJ88 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L6P0CJ89 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L7P0CJ90 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 CTRB1P17538 263 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 PSMC3P17980 439 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 OR1E1P30953 314 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 RFC3P40938 356 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 SELENOTP62341 195 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 SP4Q02446 784 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 STX3Q13277 289 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 CTRB2Q6GPI1 263 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4L9Q6RFH8 374 aaPredicted RBP4.92□□□□□ -1.62
PBRM1-220ENST00000480064 RDH10Q8IZV5 341 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 PRELID2Q8N945 189 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 ERMNQ8TAM6 284 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 ITCHQ96J02 903 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 PSMB7Q99436 277 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 RARRES2Q99969 163 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 MED10Q9BTT4 135 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 CWH43Q9H720 699 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 PATZ1Q9HBE1 687 aaKnown RBP4.92□□□□□ -1.62
PBRM1-220ENST00000480064 PRSS16Q9NQE7 514 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 EXD2Q9NVH0 621 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 DUX4Q9UBX2 424 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 MTRF1LQ9UGC7 380 aaKnown RBP4.92□□□□□ -1.62
PBRM1-220ENST00000480064 ENPP5Q9UJA9 477 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 RCL1Q9Y2P8 373 aaKnown RBP4.92□□□□□ -1.62
PBRM1-220ENST00000480064 CCDC88BA6NC98 1476 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 ADGRA3Q8IWK6 1321 aa4.92□□□□□ -1.62
PBRM1-220ENST00000480064 ANKRD36BQ8N2N9 1353 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 SETD5Q9C0A6 1442 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 PHF3Q92576 2039 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 IGLV3-22A0A075B6J6 115 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 RBMY1BA6NDE4 496 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 RBMY1EA6NEQ0 496 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 FAM220BPB1ANY3 271 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 PRMT5O14744 637 aaPredicted RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 SLC9A3R1O14745 358 aaPredicted RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 MRPS12O15235 138 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 GMDSO60547 372 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 NIPSNAP2O75323 286 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 FKBP6O75344 327 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 EIF3GO75821 320 aaKnown RBP eCLIP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 RPN2P04844 631 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 RBMY1DP0C7P1 496 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 RBMY1A1P0DJD3 496 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 CALM1P0DP23 149 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 CALM2P0DP24 149 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 CALM3P0DP25 149 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 IDO1P14902 403 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 HOXB6P17509 224 aaKnown RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 BGNP21810 368 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 PCK1P35558 622 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 ARR3P36575 388 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 CLDN6P56747 220 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 ERVPABLB-1P60509 514 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 SKP1P63208 163 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 CD47Q08722 323 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 IFFO1Q0D2I5 559 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 TGIF1Q15583 401 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 NHLRC3Q5JS37 347 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 WDR74Q6RFH5 385 aaPredicted RBP4.91□□□□□ -1.62
PBRM1-220ENST00000480064 OR2W3Q7Z3T1 314 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 PPP1R27Q86WC6 154 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 PIANPQ8IYJ0 282 aa4.91□□□□□ -1.62
PBRM1-220ENST00000480064 NUBPLQ8TB37 319 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms