RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	SVOPL	Q8N434	492 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	LINC01356	Q8N9X3	169 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR5J2	Q8NH18	312 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	GNPDA2	Q8TDQ7	276 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLCO4A1	Q96BD0	722 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	PTDSS2	Q9BVG9	487 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	RBM4	Q9BWF3	364 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	BCO1	Q9HAY6	547 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	NOX1	Q9Y5S8	564 aa		13.55	□□□□□ -0.24
HDLBP-238	ENST00000479894	TRBV4-1	A0A0J9YWV2	114 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR6C65	A6NJZ3	312 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	TRIM77	I1YAP6	450 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	TIPRL	O75663	272 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	ANXA8	P13928	327 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	IGHV1-2	P23083	117 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	GRPR	P30550	384 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	LIMS1	P48059	325 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLC16A1	P53985	500 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	UGT2B15	P54855	530 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	SPOCK1	Q08629	439 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	RASGEF1B	Q0VAM2	473 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	COX10	Q12887	443 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	C1D	Q13901	141 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	OAF	Q86UD1	273 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZDHHC13	Q8IUH4	622 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	LRRC17	Q8N6Y2	441 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	ANKK1	Q8NFD2	765 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF418	Q8TF45	676 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	GIPC3	Q8TF64	312 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	OXGR1	Q96P68	337 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	SRXN1	Q9BYN0	137 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	BPESC1	Q9GZL8	116 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	S100A14	Q9HCY8	104 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	MEPE	Q9NQ76	525 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	STX18	Q9P2W9	335 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	ENOPH1	Q9UHY7	261 aa		13.54	□□□□□ -0.24
HDLBP-238	ENST00000479894	IGKV3D-15	A0A087WSY6	115 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894		M0R082	166 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	TMPRSS2	O15393	492 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ENTPD5	O75356	428 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	AKR7A3	O95154	331 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ASAH2B	P0C7U1	165 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF43	P17038	809 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	FPR3	P25089	353 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ERF	P50548	548 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	DVL1P1	P54792	670 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	IL1RL1	Q01638	556 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	PUDP	Q08623	228 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZP4	Q12836	540 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	SWI5	Q1ZZU3	235 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ABLIM2	Q6H8Q1	611 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	C1orf94	Q6P1W5	598 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	SHQ1	Q6PI26	577 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	USP43	Q70EL4	1123 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	PXK	Q7Z7A4	578 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	GALNT5	Q7Z7M9	940 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	UEVLD	Q8IX04	471 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	TMEM99	Q8N816	258 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR4C15	Q8NGM1	316 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	OR5K1	Q8NHB7	308 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF417	Q8TAU3	575 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	PYDC1	Q8WXC3	89 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	SORCS2	Q96PQ0	1159 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	PSD2	Q9BQI7	771 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	FUZ	Q9BT04	418 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	PRSS50	Q9UI38	385 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894	SLC25A15	Q9Y619	301 aa		13.53	□□□□□ -0.24
HDLBP-238	ENST00000479894		G3V2T6	193 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	PLPP3	O14495	311 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	TACSTD2	P09758	323 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	ADORA3	P0DMS8	318 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	AHCY	P23526	432 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF83	P51522	516 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	CHN2	P52757	468 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	CDH15	P55291	814 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	LGALS3BP	Q08380	585 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	TSPAN31	Q12999	210 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZBED5	Q49AG3	693 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	TBPL2	Q6SJ96	375 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	GPAT4	Q86UL3	456 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	OR10G2	Q8NGC3	310 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	PFN4	Q8NHR9	129 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	ZNF747	Q9BV97	191 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	TEX12	Q9BXU0	123 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	METTL17	Q9H7H0	456 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	PDP1	Q9P0J1	537 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894		U3KQV3	271 aa		13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894	PRKDC	P78527	4128 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-238	ENST00000479894		A0A1W2PRG6	482 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	UNC119B	A6NIH7	251 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	BLOC1S5-TXNDC5	H3BN57	136 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	RNF13	O43567	381 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	NR2C1	P13056	603 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	GIF	P27352	417 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	OMP	P47874	163 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	HILS1	P60008	231 aa		13.51	□□□□□ -0.25
HDLBP-238	ENST00000479894	SLC17A1	Q14916	467 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms