RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 GLOD5A6NK44 160 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 TMPRSS11DO60235 418 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SOX15O60248 233 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 TDGQ13569 410 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 ANKRD16Q6P6B7 361 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 TAF8Q7Z7C8 310 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 SLC35F2Q8IXU6 374 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 BHLHE23Q8NDY6 225 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 PHYHIPQ92561 330 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 AMDHD1Q96NU7 426 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 NKX3-1Q99801 234 aaPredicted RBP19.31■□□□□ 0.68
SDF4-206ENST00000478938 MRI1Q9BV20 369 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 RNF126Q9BV68 326 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 KCNG2Q9UJ96 466 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 PCDHB8Q9UN66 801 aa19.31■□□□□ 0.68
SDF4-206ENST00000478938 PAX1P15863 534 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 GRPRP30550 384 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 NTSP30990 170 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 NCBP2P52298 156 aaKnown RBP eCLIP19.3■□□□□ 0.682e-6■■□□□ 13
SDF4-206ENST00000478938 SLC9A5Q14940 896 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 TPRG1Q6ZUI0 275 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 SLC35F3Q8IY50 421 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 BPIFB2Q8N4F0 458 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 SLC25A43Q8WUT9 341 aaPredicted RBP19.3■□□□□ 0.68
SDF4-206ENST00000478938 CST11Q9H112 138 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 GPRIN2O60269 458 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 ZIC2O95409 532 aaPredicted RBP19.3■□□□□ 0.68
SDF4-206ENST00000478938 LRG1P02750 347 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 ZBTB25P24278 435 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 HSD11B2P80365 405 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 TMEM205Q6UW68 189 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 ZNF836Q6ZNA1 936 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 LYG2Q86SG7 212 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 AMER3Q8N944 861 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 OR13C8Q8NGS7 320 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 OR4C6Q8NH72 309 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 ROBO4Q8WZ75 1007 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 ARSGQ96EG1 525 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 BCO1Q9HAY6 547 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 SIRT7Q9NRC8 400 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 CLDND1Q9NY35 253 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 HAO2Q9NYQ3 351 aa19.3■□□□□ 0.68
SDF4-206ENST00000478938 SEC14L6B5MCN3 397 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 H0YIZ8 118 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 FCMRO60667 390 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 FKTNO75072 461 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 ZNF28P17035 718 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 BSGP35613 385 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 HMGN3Q15651 99 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 SLC35D3Q5M8T2 416 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 ACBD4Q8NC06 268 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 OR5B2Q96R09 309 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 RIOK2Q9BVS4 552 aaKnown RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 PARP12Q9H0J9 701 aaKnown RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 ZNF223Q9UK11 482 aaPredicted RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 MMACHCQ9Y4U1 282 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 ANAPC1Q9H1A4 1944 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 TRAV8-7A0A075B6U6 113 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 OR1F1O43749 312 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 TBL1XO60907 577 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 CKMP06732 381 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 SLC2A1P11166 492 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 FABP4P15090 132 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 RAB6AP20340 208 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 TAS2R19P59542 299 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 PPA1Q15181 289 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 GKN2Q86XP6 184 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 OR2L13Q8N349 312 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 PNLDC1Q8NA58 520 aaKnown RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 SLC2A12Q8TD20 617 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 MVB12AQ96EY5 273 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 CNN2Q99439 309 aaKnown RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 PRSS27Q9BQR3 290 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 CRLF2Q9HC73 371 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 MYOZ1Q9NP98 299 aaPredicted RBP19.29■□□□□ 0.68
SDF4-206ENST00000478938 KLHL28Q9NXS3 571 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 AMDHD2Q9Y303 409 aa19.29■□□□□ 0.68
SDF4-206ENST00000478938 NUP210Q8TEM1 1887 aaPredicted RBP19.28■□□□□ 0.68
SDF4-206ENST00000478938 FAM221BA6H8Z2 402 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 TGM3Q08188 693 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 ZNF227Q86WZ6 799 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 CARFQ8N187 725 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 HIST3H2BBQ8N257 126 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 MR1Q95460 341 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 KCNIP3Q9Y2W7 256 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.28■□□□□ 0.68
SDF4-206ENST00000478938 MKRN2OSH3BPM6 223 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 OR2T7P0C7T2 308 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 ZNF735P0CB33 412 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 CSRP1P21291 193 aaKnown RBP19.28■□□□□ 0.68
SDF4-206ENST00000478938 VAMP1P23763 118 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 RPS23P62266 143 aaKnown RBP19.28■□□□□ 0.68
SDF4-206ENST00000478938 GRB14Q14449 540 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 Q6ZRG5 221 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 HIST2H3AQ71DI3 136 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 PRSS35Q8N3Z0 413 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 OR2T27Q8NH04 317 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 GPX8Q8TED1 209 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 SLC6A7Q99884 636 aa19.28■□□□□ 0.68
SDF4-206ENST00000478938 SPOCK3Q9BQ16 436 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms